Welcome to Acta Agronomica Sinica,

Acta Agron Sin ›› 2010, Vol. 36 ›› Issue (08): 1258-1264.doi: 10.3724/SP.J.1006.2010.01258

• CROP GENETICS & BREEDING · GERMPLASM RESOURCES · MOLECULAR GENETICS • Previous Articles     Next Articles

Screening of Rice Resources against Rice Black-Streaked Dwarf Virus and Mapping of Resistant QTL

WANG Bao-Xiang1,JIANG Ling1**,CHEN Liang-Ming1,LU Bai-Guan2,WANG Qi1,LI Guang-Quan1,FAN Ji-Wei2,CHENG Xia-Nian1,ZHAI Hu-Qu3,XU Da-Yong2,WAN Jian-Min13*   

  1. 1 State Key Laboratory of Crop Genetics and Germplasm Enhancement / Jiangsu Plant Gene Engineering Research Center, Nanjing Agricultural University, Nanjing 210095, China; 2 Institute of Lianyungang Agricultural Science of Xuhuai Area , Lianyungang 222006, China; 3 Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
  • Received:2010-03-04 Revised:2010-04-22 Online:2010-08-12 Published:2010-06-11

Abstract: Rice black-streaked dwarf virus(RBSDV)disease become epidemic in Jiangsu and Zhejiang provinces. To screen resistant germplasms and discover new resistance genes/QTLs against RBSDV, we evaluated the resistance to RBSDV in 311 japonica cultivars in field test. The results showed that no cultivar was immune to RBSDV. The disease rate of 24 main japonica cultivars grown in Jiangsu province at present was 10.0%–29.0% and that of 71.5% cultivars in 287 japonicapopularized in Jiangsu beforewas between 10.0% and 30.0%. Furthermore, quantitative trait loci (QTL) analysis was conducted by using 162 recombinant inbred lines (RILs), which derived from a cross between Guichao 2, a susceptible indica variety, and Koshihikari, a japonica variety with resistance to RBSDV. RBSDV resistances were evaluated using natural infection methods by scoring the disease rating. One putative QTL (qRBSDV3) controlling RBSDV resistance was mapped between the marker RM7 and RM5748 on chromosome 3, which explained 17.1% of the total phenotypic variation with LOD score of 5.4. The positive resistant effect contributed from Koshihikari. Further analysis revealed that the lines harboring the alleles of qRBSDV3 exhibited significantly increased resistance to RBSDV. The results should be very useful for breeding new RBSDV-resistant cultivars by marker-assisted selection (MAS). cultivars

Key words: Rice, Rice black-streaked dwarf virus, Screening resistant germplasm, QTL mapping

[1]         Milne R G, Lovisolo O. Maize rough dwarf and related viruses. Adv Virus Res, 1977, 21: 267–341

[2]         Azuhata F, Uyeda I, Kimura I, Shikata E. Close similarity between genome structures of rice black-streaked dwarf and maize rough dwarf viruses. J Gen Virol, 1993, 74: 1227–1232

[3]         Li A-H(李爱宏), Dai Z-Y(戴正元), Ji H-J(季红娟), Zhang X-X(张小祥), Li Y-H(李育红), Pan C-H(潘存红), Zhang H-Y(张洪熙), Pan X-B(潘学彪). Preliminary analysis on resistance of rice black-streaked dwarf viral disease for germplasms with different gene-types. J Yangzhou Univ (扬州大学学报), 2008, 29(3): 73–77 (in Chinese with English abstract)

[4]         Li D-B(李德葆), Wang G-C(王拱辰), Sheng F-J(盛方镜). Epidemological study on rice virus disease and their control in Zhejiang province. Acta Phytopathol Sin (植物病理学报), 1979, 9(2): 73–87 (in Chinese with English abstract)

[5]         Heng M Z, Yang J, Chen J P, Adama M J. A black-streaked dwarf disease on rice in China is caused by a novel fijivirus. Arch Virol, 2008, 153: 1893–1898

[6]         Zhang H M, Chen J P, Lei J L, Adama M J. Sequence analysis shows that a dwarfing disease on rice, wheat and maize in China is caused by rice black-steaked dwarf virus. Eur J Plant Pathol, 2001, 107: 563–567

[7]         Wang H D, Chen J P, Wang A G, Jiang X H, Adama M J. Studies on th epidemiology and yield losses from rice black-streaked dwarf disease in a recent epidemic in Zhejiang province, China. Plant Pathol, 2009, 58, 815–825

[8]         Pan C-H(潘存红), Li A-H(李爱宏), Chen Z-X(陈宗祥), Wu L-B(吴林波), Dai Z-Y(戴正元), Zhang H-X(张洪熙), Huang L-S(黄年生), Chen X-J(陈夕军), Zhang Y-F(张亚芳), Zuo S-M(左示敏), Pan X-B(潘学彪). Detection of QTL for resistance to rice black-streaked dwarf viral disease. Acta Agron Sin (作物学报) 2009, 35(12): 2213–2217 (in Chinese with English abstract)

[9]         Beijing Agricultural University (北京农业大学). Plant Pathology of Agriculture(农业植物病理学). Beijing: Agriculture Press, 1982 (in Chinese)

[10]      Zhang H M, Chen J P, Adams M J. Molecular characterization of segments 1 to 6 of rice black-streaked dwarf virus from China provides the complete genome. Arch Virol, 2001, 146: 2331–2339

[11]      Zuhata F, Uyeda I, Kimura I. Close similarity between genome structures of rice black-streaked dwarf virus and maize rough dwarf virus. J Gen Virol, 1993, 74: 1227–1232

[12]      Sogai M, Uyeda I, Lee B C. Detection and assignment of proteins encoded by rice black streaked dwarf fiji virus S7, S8, S9 and S10. J Gen Virol, 1998, 79: 1487–1494

[13]      Marzachi C M, Boccardo G, Nuse D. Cloning of the maize rough dwarf virus genome: Molecular confirmation of the plant-reovirus classification scheme and identification of two large nonoverlapping coding domains with a single genomic segment. Virology, 1991, 180: 518–526

[14]      Bai F W, Yan J, Qu Z C, Zhang H W, Xu J, Ye M M, Shen D L. Phylogenetic analysis reveals that a dwarfing disease on different cereal crops in China is due to rice black streaked dwarf virus (RBSDV). Virus Genes, 2002, 25: 201–206

[15]      Wang C-H(王朝辉), Zhou Y-J(周益军), Fan Y-J(范永坚). Detection of rice black-streaked dwarf Fifivirus by RT-PCR, dot-blot hybridization and SDS-PAGE. J Nanjing Agric Univ (南京农业大学学报), 2001, 24 (4): 24–28 (in Chinese with English abstract)

[16]      Wang Z H, Fang S G, Zhang Z Y, Han C G, Li D W, Yu J L. Development of an ID-ELISA for the detection of rice black-streaked dwarf virus in plants. J Virol Methods, 2006, 134 (1-2): 61-5

[17]      Zhou G-H(周国辉), Wen J-J(温锦君), Cai D-J(蔡德江), Li P(李鹏), Xu D-L(许东林), Zhang S-G(张曙光). Chin Sci Bull (科学通报), 2007, 53 (20): 2500–2508 (in Chinese with English abstract)

[18]      Basten C J, Weir B S, Zeng Z B. QTL Cartographer, Version 1.16. 2002. Department of Statistics, North Carolina State University, Raleigh, NC. http://www.statgen.ncsu.edu/qtlcart

[19]      McCouch S R, Cho Y G, Yano M, Paule E, Blinstrue M, Mor-ishima H M, Kinosita T. Report on QTL nomenclature. Rice Genet Newsl, 1997, 14: 11-13

[20]      Hibino H. Biology and epidemiology of rice viruses. Annu Rev Phytopathol, 1996, 34: 249–274

[21]      Zhou T(周彤), Fan Y-J(范永坚), Chen Z-B(程兆榜), Zhou Y-J(周益军). Advances on resistance to rice stripe disease in rice cultivars. J Plant Genet Resour (植物遗传资源学报), 2009, 10(2): 328–333 (in Chinese with English abstract)

[22]      Sun D-Z(孙黛珍), Jiang L(江玲), Zhang Y-X(张迎信), Cheng X-N(程遐年), Zhai H-Q(翟虎渠), Wan J-M(万建民). Detection of QTL Associated with Rice Stripe Resistance in Cultivar IR24. Acta Agron Sin (作物学报), 2007, 33(1): 25–30 (in Chinese with English abstract)

[23]      Ding X-L(丁秀兰), Jiang L(江玲), Zhang Y-X(张迎信), Sun D-Z(孙黛珍), Zhai H-Q(翟虎渠), Wan J-M(万建民). QTL detection for rice stripe disease resistance using backcross inbred lines. Acta Agron Sin (作物学报), 2005, 31(8): 1041–1046 (in Chinese with English abstract)
[1] Zheng Yu-Zhen, Qi Fei-Yan, Sun Zi-Qi, Liu Hua, Qin Li, Shi Lei, Wang Juan, Wang Meng-Meng, Han Suo-Yi, Xu Jing, Miao Li-Juan, Huang Bing-Yan, Dong Wen-Zhao, Zheng Zheng, Zhang Xin-You. QTL mapping of total very long-chain fatty acids and seven fatty acid components in peanut seeds [J]. Acta Agronomica Sinica, 2026, 52(6): 1646-1657.
[2] Hu Zhao, Qian Run, Xie Feng-Pu, Ying Su-Ping. Genome-wide identification and expression analysis of the SPX gene family in rice under phosphorus treatment [J]. Acta Agronomica Sinica, 2026, 52(6): 1902-1912.
[3] Zou Yi-Mei, Xu Min, Wang Hai-Yang, Yao Hui, Wang Jia-Feng, Liu Hao, Ren Dai-Sheng. Analysis of transcription factor regulatory networks in two-line male sterile rice seedling roots in response to salt stress [J]. Acta Agronomica Sinica, 2026, 52(6): 1728-1742.
[4] Yan An, Jiang Kun-Wei, Wang Rong-Yuan, Tian Lin, Zhang Lu, Wang Yun, Xu Jian-Long. Identification and cloning of SVN7 controlling small vascular bundle number in the rice flag leaf [J]. Acta Agronomica Sinica, 2026, 52(5): 1364-1372.
[5] Chen Wei, Wei Wan-Juan, Zhao Qi-Bing, Chang Dong-Wei, Yu Ling-Bo, Zhai Peng-Fei, Feng Zhi-Ming, Chen Zong-Xiang, Ren Yang-Tao, Yang Peng, Liu Hai-Lang, Li Zhen-Fu, Yang Yong-Le, Jin Yan-Gang, Zuo Shi-Min. Developing new germplasm of high-quality and early-maturing rice by editing Hd6 via CRISPR/Cas9 [J]. Acta Agronomica Sinica, 2026, 52(4): 1046-1056.
[6] Shi Shao-Jie, Liu Kai, Chen Zi-Yi, Wang Hui-Ying, Li San-He, Zhou Lei, You Ai-Qing. Cloning and functional analysis of the dwarf and multi-tiller gene DMT1 in rice [J]. Acta Agronomica Sinica, 2026, 52(4): 1022-1034.
[7] Liu Chang-You, Wang Shen, Shi Hui-Ying, Shen Ying-Chao, Sun Lei, Wang Yan, Zhang Zhi-Xiao, Su Qiu-Zhu, Tian Jing, Fan Bao-Jie. QTL mapping for bruchid resistance in an adzuki bean distant hybridization population using rice bean genetic resources [J]. Acta Agronomica Sinica, 2026, 52(3): 936-944.
[8] Ye Fan, Li Shuai, Li Si-Yu, Chen Yun, Dou Chao-Yin, Liu Li-Jun. Effects of water-saving irrigation on rice yield and population quality in Northeast China [J]. Acta Agronomica Sinica, 2026, 52(3): 895-907.
[9] Liu Ning, Fan Ping, Wang Cheng, Chen Qi-Qi, Cheng Qing-Yue, Tie Xia-Na, Tang Jing-Sha, Liu Bin-Bin, Xie Hong-Kun, Wang Jia-Yue, Shi Yuan-Qing, Ma Jun. Effects of reduced nitrogen application combined with organic fertilizer on yield formation and nitrogen utilization in mechanically transplanted rice [J]. Acta Agronomica Sinica, 2026, 52(3): 866-880.
[10] Qin Yi-Yan, Fu Yao, Su Chang, Li Na, Xu Jing-Ru, Cheng Xiao-Ran, Zhang Qi, Zhao Ming-Hui. Functional analysis of OsST41 regulating salt tolerance in rice seedlings [J]. Acta Agronomica Sinica, 2026, 52(3): 802-812.
[11] Zhu Jin-Juan, Wang Hui-Ping, Yang Guo-Dong, Wang Yu-Cheng, Yang Chen, Wang Bin, Agustiani Nurwulan, Tu Jun-Ming, Bi Jun-Guo, Cui Ke-Hui, Huang Jian-Liang, Peng Shao-Bing, Yuan Shen. Effects of water management and variety type on grain yield and quality in ratoon rice [J]. Acta Agronomica Sinica, 2026, 52(1): 295-315.
[12] WANG Chan, WU Ying-Ying, LI Wen-Qi, LI Xia, WANG Fang-Quan, ZHOU Tong, YANG Jie. Development of functional markers of rice stripe disease resistance gene STV11 based on HRM technique [J]. Acta Agronomica Sinica, 2025, 51(9): 2547-2556.
[13] GUO Bao-Wei, WANG Wang, WANG Kai, WANG Yan, ZENG Xin, JING Xiu, WANG Jing, NI Xin-Hua, XU Ke, ZHANG Hong-Cheng. Population dynamic characteristics and formation mechanisms of super high-yielding of two types of glutinous rice in the middle and lower reaches of the Yangtze Rive [J]. Acta Agronomica Sinica, 2025, 51(9): 2433-2453.
[14] CHEN Hui-Ying, HE Jia-Xin, ZHU Bin, HUANG Shi-Xuan, ZHOU Xing-You, WU Jun-Quan, YANG Mei-Yan. Whole genome analysis and biological characterization of phage vB_XaS_ HDB2 infected with Xanthomonas oryzae pv. oryzae [J]. Acta Agronomica Sinica, 2025, 51(8): 2087-2099.
[15] HU Meng, SHA Dan, ZHANG Sheng-Rui, GU Yong-Zhe, ZHANG Shi-Bi, LI Jing, SUN Jun-Ming, QIU Li-Juan, LI Bin. QTL mapping and candidate gene screening for branch number in soybean [J]. Acta Agronomica Sinica, 2025, 51(7): 1747-1756.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!