Welcome to Acta Agronomica Sinica，

Acta Agron Sin ›› 2011, Vol. 37 ›› Issue (05): 778-783.doi: 10.3724/SP.J.1006.2011.00778

• CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS • Previous Articles     Next Articles

Analysis of Quantitative Trait Loci for Resistance to Rice False Smut

LI Yu-Sheng,HUANG Sheng-Dong,YANG Juan,WANG Cai-Lin   

  1. Institute of Food Crops, Jiangsu Academy of Agricultural Sciences / Jiangsu High Quality Rice Research and Development Center, Nanjing 210014, China
  • Received:2010-09-21 Revised:2011-01-06 Online:2011-05-12 Published:2011-02-24

PDF

1984

Cited

8

Abstract: A recombinant inbred line(RILs) population with 157 lines derived from an inter-subspecies cross of Daguandao/IR28 by the single seed descent method was used to detect quantitative trait loci (QTLs) conferring resistance to rice false smut [caused by U stilaginoidea virens (Cooke) Takahashi] in 2007 and 2009. The disease rate index of the two parents and 157 RILs caused by rice false smut were scored and the QTLs for rice false smut resistance were detected accordingly by QTL Cartographer software. Seven QTLs controlling false smut resistance were detected on chromosomes 1, 2, 4, 8, 10, 11, and 12, respectively, with the phenotypic variance of 9.8%–22.5%. There were five and four QTLs detected in 2007 and 2009, respectively, and only two QTLs were found in both two years, the phenotypic variation was explained by individual QTL ranged from 18.0% to 19.3% for these two QTLs,and the additive effects of these two QTLs contributed to the 8.0%–16.5% decrease of disease index and therefore the disease resistance increased. The direction of the additive effects at six loci qFsr1, qFsr2, qFsr8, qFsr10, qFsr11, and qFsr12 coincided with that predicted by phenotypes of the parents, and the IR28 alleles at these loci had positive effect against rice false smut while the negative effects were found in Daguandao alleles at qFsr4. Both qFsr11 and qFsr12 should be useful in rice breeding for resistance to rice false smut in marker-assisted selection (MAS) program.

Key words: Rice, Rice false smut, Disease resistance, Quantitative trait locus

[1]Ou S H. Rice Disease. Kew, Surrey, UK: CAB/CMI, 1985. pp 307–311
[2]Nakamura K I, Izumiyama N. Lupiosis in rice caused by ustiloxin and crude extract of fungal culture of Ustilaginoidea virens. Proc Jpn Assoc Mycotoxicol, 1992, 35: 41–43
[3]Dhindsa H S, Aulakh K S, Chahal S S. Incidence and assessment of losses due to false smut of rice in Punjab. Indian Phytopathol, 1991, 44: 120–121
[4]Chib H S, Tikoo M L, Kalha C S. Effect of false smut on yield of rice. Indian J Mycol Plant Pathol, 1992, 22: 278–280
[5]Sinha R K P, Sinha B B P, Singh A P. Assessment of yield loss due to false smut disease of rice. J Appl Biol, 2003, 13: 35–37
[6]Ji H-P(季宏平). Preliminary study on yield loss of rice damaged by rice false smut and chemical control to the disease. Heilongjiang Agric Sci (黑龙江农业科学), 2000, (4): 18–19 (in Chinese)
[7]Iwasaki S. Chemistry and biological activity of the mycotoxins interfering with tubulin function. Proc Jpn Assoc Mycotoxicol, 1992, 35: 1–6
[8]Koiso Y, Li Y, Iwasaki S, Hanaoka K, Kobayashi T, Sonoda R, Fujita Y, Yaegashi H, Sato Z. Ustiloxins antimitotic cyclic peptides from false smut balls on rice panicles caused by Ustilaginoidea virens. J Antibiotics, 1994, 47: 765–773
[9]Li Y, Kosio Y, Hanaoka K, Yaegashi H. Ustiloxins new antimitotic cyclic peptides: interaction with porcine brain tubulin. Biochem Pharmacol, 1995, 49: 1367–1372
[10]Nakamura K I, Izumiyama N, Ohtsubo K I. “Lupinosis”-like lesions in mice caused by ustiloxin, produced by Ustilaginoidea virens: a morphological study. Nat Toxins, 1994, 2: 22–28
[11]Huang S-W(黄世文), Yu L-Q(余柳青). Present situation of studies on rice false smut (Ustilaginoidea virens) in China. Acta Agric Jiangxi (江西农业学报), 2002, 14(2): 45–51 (in Chinese with English abstract)
[12]Li X-J(李小娟), Liu E-M(刘二明), Xiao Q-M(肖启明), Su S-J(苏世杰), Zhao Z-X(赵志祥). Advances on studies about false smut of rice. Agrochemicals Research & Application (农药研究与应用), 2006, 10(2): 9–12 (in Chinese with English abstract)
[13]Liu Y-F(刘永锋), Chen Z-Y(陈志谊), Lu F(陆凡), Liu Y-Z(刘邮洲). Study on controlling rice false smut. J Jingling Inst Technol (金陵科技学院学报), 2004, 20(3): 42–45 (in Chinese with English abstract)
[14]Li Y-S(李余生), Zhu Z(朱镇), Zhang Y-D(张亚东), Zhao L(赵凌), Wang C-L(王才林). Genetic analysis of rice false smut resistance using major gene plus polygene mixed genetic model. Acta Agron Sin (作物学报), 2008, 34(10): 1728–1733
[15]Xu J-L(徐建龙), Xue Q-Z(薛庆中), Luo L-J(罗利军), Li Z-K(黎志康). Preliminary report on quantitative trait loci mapping of false smut resistance using near isogonics introgression lines in rice. Acta Agric Zhejiangensis (浙江农业学报), 2002, 14(1): 14–19 (in Chinese with English abstract)
[16]Zhang J-C(张君成), Zhang B-X(张炳欣), Chen Z-Y(陈志谊), Liu Y-F(刘永锋), Lu F(陆凡). Preliminary study on inoculation method of rice false smut and its effect. Chin Rice Sci (中国水稻科学), 2003, 17(4): 390–392 (in Chinese with English abstract)
[17]Zhang J-C(张君成), Chen Z-Y(陈志谊), Zhang B-X(张炳欣), Liu Y-F(刘永锋), Lu F(陆凡). Inoculation techniques used for inducing rice false smut efficiently. Acta Phytopathol Sin (植物病理学报), 2004, 34(5): 463–467 (in Chinese with English abstract)
[18]Tang C-S(唐春生), Gao J-Z(高家樟), Cao G-P(曹国平), Huang S-X(黄守行), Liu E-M(刘二明), Liu C-L(刘承龙), Xie W (谢伟), Luo X-Y(罗学义), Xiao Q(肖青). Research and application of classification standard of rice false smut. Hunan Agric Univ (湖南农业大学学报), 2000, 26(2): 122–125 (in Chinese with English abstract)
[19]Tang C-S(唐春生), Gao J-Z(高家樟), Cao G-P(曹国平). Research and application of classification standard of rice false smut. Plant Protect (植物保护), 2001, 27(1): 18–21 (in Chinese)
[20]Collard B C Y, Jahufer M Z Z, Brouwer J B, Pang E C K. An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement: the basic concepts. Euphytica, 2005, 142: 169–196
[21]Mc Couch S R, Cho Y G, Yano M. Paul E, Blinstrub M, Morishima H, Kinoshita T. Report on QTL nomenclature. Rice Genet Newsl, 1997, 14: 11–13
[22]Kunihiro Y(国广泰史), Qian Q(钱前), Sato H(佐藤宏之), Teng S(滕胜), Zeng D-L(曾大力), Fujimoto K(藤本宽), Zhu L-H(朱立煌). QTL analysis of sheath blight resistance in rice (Oryza sativa L.). Acta Genet Sin (遗传学报), 2002, 29(1): 50–55
[23]Miao Q-M(缪巧明), Wang Y-H(王永华). Study on the technique of identification of resistance to Ustilaginoidea virens (Cooke) Tak. for rice cultivars. Southwest China J Agric Sci (西南农业学报), 1994, 7(2): 67–70 (in Chinese with English abstract)
[24]Dai G-H(代光辉), Zhao J(赵杰), He R-M(何润梅), Jin S-X(金素心), Nicole M. Histochemical observation on the resistant and susceptible varieties to Ustilaginoidea virens (Cooke) Tak. and the way of infection of conidia. Acta Phytopathol Sin (植物病理学报), 2005, 35(1): 37–42 (in Chinese with English abstract)
[25]Ansario M M, Ram T, Shama T. Yield loss assessment in promising rice cultures due to false smut. Oryza, 1988, 25: 207–209
[26]Ding X-L(丁秀兰), Jiang L(江玲), Liu S-J(刘世家), Wang C-M(王春明), Chen L-M(陈亮明), Cheng Z-B(程兆榜), Fan Y-J(范永坚), Zhou Y-J(周益军), Wan J-M(万建民). QTL analysis for rice stripe disease resistance gene using recombinant inbred lines (RILs) derived from crossing of Kinmaze and DV85. Acta Genet Sin (遗传学报), 2004, 31(3): 287–292 (in Chinese with English abstract)
[1] TIAN Tian, CHEN Li-Juan, HE Hua-Qin. Identification of rice blast resistance candidate genes based on integrating Meta-QTL and RNA-seq analysis [J]. Acta Agronomica Sinica, 2022, 48(6): 1372-1388.
[2] ZHENG Chong-Ke, ZHOU Guan-Hua, NIU Shu-Lin, HE Ya-Nan, SUN wei, XIE Xian-Zhi. Phenotypic characterization and gene mapping of an early senescence leaf H5(esl-H5) mutant in rice (Oryza sativa L.) [J]. Acta Agronomica Sinica, 2022, 48(6): 1389-1400.
[3] ZHOU Wen-Qi, QIANG Xiao-Xia, WANG Sen, JIANG Jing-Wen, WEI Wan-Rong. Mechanism of drought and salt tolerance of OsLPL2/PIR gene in rice [J]. Acta Agronomica Sinica, 2022, 48(6): 1401-1415.
[4] ZHENG Xiao-Long, ZHOU Jing-Qing, BAI Yang, SHAO Ya-Fang, ZHANG Lin-Ping, HU Pei-Song, WEI Xiang-Jin. Difference and molecular mechanism of soluble sugar metabolism and quality of different rice panicle in japonica rice [J]. Acta Agronomica Sinica, 2022, 48(6): 1425-1436.
[5] YAN Jia-Qian, GU Yi-Biao, XUE Zhang-Yi, ZHOU Tian-Yang, GE Qian-Qian, ZHANG Hao, LIU Li-Jun, WANG Zhi-Qin, GU Jun-Fei, YANG Jian-Chang, ZHOU Zhen-Ling, XU Da-Yong. Different responses of rice cultivars to salt stress and the underlying mechanisms [J]. Acta Agronomica Sinica, 2022, 48(6): 1463-1475.
[6] YANG Jian-Chang, LI Chao-Qing, JIANG Yi. Contents and compositions of amino acids in rice grains and their regulation: a review [J]. Acta Agronomica Sinica, 2022, 48(5): 1037-1050.
[7] DENG Zhao, JIANG Nan, FU Chen-Jian, YAN Tian-Zhe, FU Xing-Xue, HU Xiao-Chun, QIN Peng, LIU Shan-Shan, WANG Kai, YANG Yuan-Zhu. Analysis of blast resistance genes in Longliangyou and Jingliangyou hybrid rice varieties [J]. Acta Agronomica Sinica, 2022, 48(5): 1071-1080.
[8] YANG De-Wei, WANG Xun, ZHENG Xing-Xing, XIANG Xin-Quan, CUI Hai-Tao, LI Sheng-Ping, TANG Ding-Zhong. Functional studies of rice blast resistance related gene OsSAMS1 [J]. Acta Agronomica Sinica, 2022, 48(5): 1119-1128.
[9] ZHU Zheng, WANG Tian-Xing-Zi, CHEN Yue, LIU Yu-Qing, YAN Gao-Wei, XU Shan, MA Jin-Jiao, DOU Shi-Juan, LI Li-Yun, LIU Guo-Zhen. Rice transcription factor WRKY68 plays a positive role in Xa21-mediated resistance to Xanthomonas oryzae pv. oryzae [J]. Acta Agronomica Sinica, 2022, 48(5): 1129-1140.
[10] WANG Xiao-Lei, LI Wei-Xing, OU-YANG Lin-Juan, XU Jie, CHEN Xiao-Rong, BIAN Jian-Min, HU Li-Fang, PENG Xiao-Song, HE Xiao-Peng, FU Jun-Ru, ZHOU Da-Hu, HE Hao-Hua, SUN Xiao-Tang, ZHU Chang-Lan. QTL mapping for plant architecture in rice based on chromosome segment substitution lines [J]. Acta Agronomica Sinica, 2022, 48(5): 1141-1151.
[11] WANG Ze, ZHOU Qin-Yang, LIU Cong, MU Yue, GUO Wei, DING Yan-Feng, NINOMIYA Seishi. Estimation and evaluation of paddy rice canopy characteristics based on images from UAV and ground camera [J]. Acta Agronomica Sinica, 2022, 48(5): 1248-1261.
[12] KE Jian, CHEN Ting-Ting, WU Zhou, ZHU Tie-Zhong, SUN Jie, HE Hai-Bing, YOU Cui-Cui, ZHU De-Quan, WU Li-Quan. Suitable varieties and high-yielding population characteristics of late season rice in the northern margin area of double-cropping rice along the Yangtze River [J]. Acta Agronomica Sinica, 2022, 48(4): 1005-1016.
[13] CHEN Yue, SUN Ming-Zhe, JIA Bo-Wei, LENG Yue, SUN Xiao-Li. Research progress regarding the function and mechanism of rice AP2/ERF transcription factor in stress response [J]. Acta Agronomica Sinica, 2022, 48(4): 781-790.
[14] WANG Lyu, CUI Yue-Zhen, WU Yu-Hong, HAO Xing-Shun, ZHANG Chun-Hui, WANG Jun-Yi, LIU Yi-Xin, LI Xiao-Gang, QIN Yu-Hang. Effects of rice stalks mulching combined with green manure (Astragalus smicus L.) incorporated into soil and reducing nitrogen fertilizer rate on rice yield and soil fertility [J]. Acta Agronomica Sinica, 2022, 48(4): 952-961.
[15] QIN Qin, TAO You-Feng, HUANG Bang-Chao, LI Hui, GAO Yun-Tian, ZHONG Xiao-Yuan, ZHOU Zhong-Lin, ZHU Li, LEI Xiao-Long, FENG Sheng-Qiang, WANG Xu, REN Wan-Jun. Characteristics of panicle stem growth and flowering period of the parents of hybrid rice in machine-transplanted seed production [J]. Acta Agronomica Sinica, 2022, 48(4): 988-1004.
Viewed
Full text


Abstract

Cited
  Shared   
  Discussed   
No Suggested Reading articles found!
Add: No.12 Zhongguancun South Street, Beijing 100081,China Email:xbzw@chinajournal.net.cn
Supported by Beijing Magtech Co.Ltd