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Acta Agron Sin ›› 2014, Vol. 40 ›› Issue (06): 965-972.doi: 10.3724/SP.J.1006.2014.00965

• CROP GENETICS & BREEDING · GERMPLASM RESOURCES · MOLECULAR GENETICS • Previous Articles     Next Articles

Development of Molecular Markers and Map Integration for Seed Color Traits in Dahuang Rape (Brassica rapa L.)

ZHAO Hui-Yan,XIAO Lu,ZHAO Zhi,DU De-Zhi*   

  1. Institute of Spring Rapeseed, Qinghai Academy of Agriculture and Forestry Sciences / Key Laboratory of Qinghai Province for Spring Rapeseed Genetic Improvement / National Key Laboratory Breeding Base of Qinghai Province for Innovation and Utilization of Plateau Crop Germplasm, Xining 810016, China
  • Received:2013-08-21 Revised:2014-03-04 Online:2014-06-12 Published:2014-04-09
  • Contact: 杜德志, E-mail: qhurape@126.com, Tel: 0971-5366520

Abstract:

 A BC4 population and a F2 population, derived from the cross between Dahuang and 09A-126 (brown seed, B. rapa), were constructed. AFLP (amplified fragment length polymorphism) methodology and bulked segregant analysis (BSA) were used to get five AFLP markers closely linked to yellow-seeded gene Brsc1, termed Y11–Y15 respectively. Five AFLP specific fragments were homologue with some sequences on chromosome A09 of Brassica rapa, which we converted into five SCAR markers, termed SC11–SC15. Seven SSR markers, BrID10607, KS10760, B089L03-3, A1–A4, tightly linked to Brsc1 were developed in the region of chromosome where Brsc1 was located. With five SCAR markers and seven SSR markers used for genotyping in F2 population, SC14 and A1 were confirmed as co-dominant markers. Using BC4 population, Brsc1 was located in the region of 1.7 Mb between Y06 and A04 on chromosome A9 with genetic distances of 0.115 cM and 0.98 cM. Y05 and Y12 co-segregated with Brsc1. The results were useful for developing yellow-seeded rapeseed lines by marker-assisted selection (MAS), and also laying the foundation for fine mapping and map-based cloning of Brsc1.

Key words: Brassica rapa L., Yellow seed, Molecular marker, Genetic map, Physical map

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