Welcome to Acta Agronomica Sinica,

Acta Agronomica Sinica

   

Drought resistance identification and SNP association analysis of wheat germplasm introduced by ICARDA at seedling stage

LI Yun-Xiang1,ZHANG Si-Tian1,HOU Wan-Wei2,ZHANG Xiao-Juan1, *   

  1. 1College of Eco-Environmental Engineering, Qinghai University, Xining 810016, Qinghai, China; 2Qinghai Academy of Agriculture and Forestry Sciences, Xining 810016, Qinghai, China
  • Received:2024-02-02 Revised:2024-06-20 Accepted:2024-06-20 Published:2024-07-10
  • Supported by:

    This study was supported by the Kunlun Talents, High-end Innovative Talents, and Cultivation of Top-notch Talents (Thousand Talents Program) Project of Qinghai Province.

Abstract:

A total of 159 wheat samples imported from the International Center for Agricultural Research in the Arid Areas (ICARDA) were used as the research subjects. To simulate drought conditions during the seedling stage, 20% PEG-6000 was applied, while a normal nutrient solution served as the control. The effects of drought on 7 physiological traits related to the seedling stage (malondialdehyde content, superoxide dismutase activity, relative conductivity, peroxidase activity, soluble sugar content, proline content, and chlorophyll content) were analyzed. Correlation analysis of drought resistance-related physiological traits in the 159 wheat samples was conducted using a 55K SNP chip. The results indicated that, following drought treatment, the levels of proline and soluble sugars increased, whereas other traits did not show consistent trends. Under normal conditions, malondialdehyde content was significantly positively correlated with peroxidase activity and highly significantly negatively correlated with proline content; peroxidase activity was highly significantly negatively correlated with soluble sugar content. Under drought stress, soluble sugar content was significantly positively correlated with malondialdehyde content and relative conductivity, while chlorophyll content was highly significantly positively correlated with soluble sugar content and significantly negatively correlated with proline content. Association analysis identified 311 drought resistance-related markers (P ≤ 0.001) across 24,151 SNP loci, distributed on all 21 wheat chromosomes, with contribution rates of 7.13%–21.11%. Eight stable loci were detected under both treatments, located on chromosomes 1B, 2B, and 6A, with contribution rates of 7.85%–14.58%. Additionally, a multiple effector locus associated with both superoxide dismutase activity and soluble sugar content was found on chromosome 3D, with a contribution rate of 7.95%–8.69%. Four significant loci associated with the drought resistance coefficient of relative conductivity, peroxidase activity, chlorophyll content, and traits such as relative conductivity, peroxidase activity, proline content, and superoxide dismutase activity under drought treatment were detected on chromosomes 2D, 3A, and 4A, with a contribution rate of 7.61%–14.74%.

Key words: wheat, seedling stage, physiological indicators, SNP, correlation analysis

[1] GAO Wei-Dong, HU Chen-Zhen, ZHANG Long, ZHANG Yan-Yan, ZHANG Pei-Pei, YANG De-Long, CHEN Tao. Cloning and functional analysis of ubiquitin-conjugating enzymes TaUBC16 gene in wheat [J]. Acta Agronomica Sinica, 2024, 50(8): 1971-1988.
[2] LIANG Jin-Yu, YIN Jia-De, HOU Hui-Zhi, XUE Yun-Gui, GUO Hong-Juan, WANG Shuo, ZHAO Qi-Zhi, ZHANG Xu-Cheng, XIE Jun-Hong. Effects of deep fertilization on ecological stoichiometric characteristics and photosynthetic carbon assimilation of flag leaves of spring wheat under drought conditions [J]. Acta Agronomica Sinica, 2024, 50(8): 2078-2090.
[3] CHEN Juan, YANG Ting-Ting, YAN Su-Hui, YONG Yu-Dong, ZHANG Shi-Ya, LI Wen-Yang. Effects of waterlogging at jointing stage on starch particle size distribution and pasting properties of soft wheat [J]. Acta Agronomica Sinica, 2024, 50(7): 1877-1884.
[4] FANG Yu-Hui, QI Xue-Li, LI Yan, ZHANG Yu, PENG Chao-Jun, HUA Xia, CHEN Yan-Yan, GUO Rui, HU Lin, XU Wei-Gang. Effects of high light stress on photosynthesis and physiological characteristics of wheat with maize C4-type ZmPEPC+ZmPPDK gene [J]. Acta Agronomica Sinica, 2024, 50(7): 1647-1657.
[5] HAN Li, TANG Sheng-Sheng, LI Jia, HU Hai-Bin, LIU Long-Long, WU Bin. Construction of SNP high-density genetic map and localization of QTL for β-glucan content in oats [J]. Acta Agronomica Sinica, 2024, 50(7): 1710-1718.
[6] BI Jun-Ge, ZENG Zhan-Kui, LI Qiong, HONG Zhuang-Zhuang, YAN Qun-Xiang, ZHAO Yue, WANG Chun-Ping. QTL mapping and KASP marker development of grain quality-relating traits in two wheat RIL populations [J]. Acta Agronomica Sinica, 2024, 50(7): 1669-1683.
[7] QIAO Zhi-Xin, ZHANG Jie-Dao, WANG Yu, GUO Qi-Fang, LIU Yan-Jing, CHEN Rui, HU Wen-Hao, SUN Ai-Qing. Difference in germination characteristics of different winter wheat cultivars under drought stress [J]. Acta Agronomica Sinica, 2024, 50(6): 1568-1583.
[8] MA Yan-Ming, LOU Hong-Yao, WANG Wei, SUN Na, YAN Guo-Rong, ZHANG Sheng-Jun, LIU Jie, NI Zhong-Fu, XU Lin. Genetic difference and genome association analysis of grain quality traits in Xinjiang winter wheat [J]. Acta Agronomica Sinica, 2024, 50(6): 1394-1405.
[9] ZHANG Zhi-Yuan, ZHOU Jie-Guang, LIU Jia-Jun, WANG Su-Rong, WANG Tong-Zhu, ZHAO Cong-Hao, YOU Jia-Ning, DING Pu-Yang, TANG Hua-Ping, LIU Yan-Lin, JIANG Qian-Tao, CHEN Guo-Yue, WEI Yu-Ming, MA Jian. Identification and verification of low-tillering QTL based on a new model of genetic analysis in wheat [J]. Acta Agronomica Sinica, 2024, 50(6): 1373-1383.
[10] ZHU Ming-Kun, BAO Jun-Hao, PANG Jing-Lu, ZHOU Shi-Qi, FANG Zhong-Yan, ZHENG Wen, ZHANG Ya-Zhou, WU Dan-Dan. Generation and identification of a resistance to stripe rust perennial intergeneric hybrid F1 between Roegneria ciliaris and common wheat [J]. Acta Agronomica Sinica, 2024, 50(6): 1406-1420.
[11] TIAN Hong-Li, YANG Yang, FAN Ya-Ming, YI Hong-Mei, WANG Rui, JIN Shi-Qiao, JIN Fang, ZHANG Yun-Long, LIU Ya-Wei, WANG Feng-Ge, ZHAO Jiu-Ran. Development of an optimal core SNP loci set for maize variety genuineness identification [J]. Acta Agronomica Sinica, 2024, 50(5): 1115-1123.
[12] CHEN Jia-Ting, BAI Xin, GU Yu-Jie, ZHANG Xiao-Wen, GUO Hui-Juan, CHANG Li-Fang, CHEN Fang, ZHANG Shu-Wei, ZHANG Xiao-Jun, LI Xin, FENG Rui-Yun, CHANG Zhi-Jian, QIAO Lin-Yi. Applicability evaluation of screen methods to identify salt tolerance in wheat at germination and seedling stages [J]. Acta Agronomica Sinica, 2024, 50(5): 1193-1206.
[13] LU Ru-Hua, WANG Wen-Xuan, CAO Qiang, TIAN Yong-Chao, ZHU Yan, CAO Wei-Xing, LIU Xiao-Jun. Research on the effects of nitrogen fertilizer and rice straw return on wheat yield and N2O emission and recommended fertilization under rice-wheat rotation pattern [J]. Acta Agronomica Sinica, 2024, 50(5): 1300-1311.
[14] XU Nai-Yin, JIN Shi-Qiao, JIN Fang, LIU Li-Hua, XU Jian-Wen, LIU Feng-Ze, REN Xue-Zhen, SUN Quan, XU Xu, PANG Bin-Shuang. Genetic similarity and its detection accuracy analysis of wheat varieties based on SNP markers [J]. Acta Agronomica Sinica, 2024, 50(4): 887-896.
[15] HUANG Hong-Sheng, ZHANG Xin-Yue, JU Hui, HAN Xue. Spectral characteristics of winter wheat canopy and estimation of aboveground biomass under elevated atmospheric CO2 concentration [J]. Acta Agronomica Sinica, 2024, 50(4): 991-1003.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!