欢迎访问作物学报,今天是

作物学报 ›› 2009, Vol. 35 ›› Issue (1): 41-47.doi: 10.3724/SP.J.1006.2009.00041

• 作物遗传育种·种质资源·分子遗传学 • 上一篇    下一篇

大豆蛋白质含量相关QTL间的上位效应和QE互作效应

单大鹏1,2,4,朱荣胜5**,陈立君6,齐照明2,刘春燕1,2,胡国华1,3,*,陈庆山2,*   

  1. 1黑龙江农垦科研育种中心,黑龙江哈尔滨 150090;2东北农业大学大豆研究所,黑龙江哈尔滨150030;3国家大豆工程技术研究中心,黑龙江哈尔滨150050;4 黑龙江省农科院绥化分院,黑龙江绥化152052;5 东北农业大学理学院,黑龙江哈尔滨150030;6 黑龙江省农业科学作物育种研究所,黑龙江哈尔滨 150086
  • 收稿日期:2008-04-20 修回日期:2008-07-14 出版日期:2009-01-12 网络出版日期:2008-11-17
  • 通讯作者: 陈庆山
  • 基金资助:

    本研究由国家重点基础研究发展计划(973计划)项目(2004CB117203-5),国家高技术研究发展计划(863计划)项目(2006AA10Z1F4),黑龙江省教育厅科技研究项目(10551029),黑龙江省博士后科研启动金(LHK-04014),黑龙江省博士后项目(LRB06-126)资助

Epistatic Effects and QE Interaction Effects of QTLs for Protein Content in Soybean

SHAN Da-Peng1,2,4,ZHU Rong-Seng5,*,CHEN Li-Jun6,QI Zhao-Ming2,HU Guo-Hua1,3,*,CHEN Qing-Shan2,*   

  1. 1Crop Research and Breeding Center of Land-Reclamation,Harbin 150090,China;2 Soybean Research Institute, Northeast Agricultural Universtity,Harbin 150030,China;3The National Research Center of Soybean Engine ering and Technology,Harbin 150050,China; 4Heilongjiang Academy of Agricultural Sciences,Suihua Institute,Suihua 152052,China;5College of Science,Northeast Agricultural University,Harbin 150030,China;6 Heilongjiang Academy of Agricultural Sciences Crop Breeding Institute, Harbin 150086,China
  • Received:2008-04-20 Revised:2008-07-14 Published:2009-01-12 Published online:2008-11-17
  • Contact: CHEN Qing-Shan

摘要:

利用Charleston×东农594重组自交系构建的SSR遗传图谱及混合线性模型方法对2002—2006连续5年的大豆蛋白质含量进行QTL定位,并作加性效应,加性×加性上位互作效应及环境互作效应分析。共检测到10个控制蛋白质含量的QTL,分别位于第B2、C2、D1a、E和N连锁群,其中1个表现为遗传正效应,9个表现为遗传负效应,另检测到15对影响蛋白质含量的加性×加性上位互作效应的QTL,解释该性状总变异的13.75%。环境互作检测中,发现9个QTL与环境存在互作,贡献率达到4.47%。

关键词: 大豆, 蛋白质含量, 混合线性模型, QTL与环境互作效应, 上位互作效应

Abstract:

Soybean [Glycine max (L). Merr.], widely grown in United States, Brazil, Argentina, and China, is one of the plant protein source. Protein content in soybean is a quantitative trait controlled by multiple genes, and Currently, SoyBase (2007) documented at least 76 QTL associated with protein content that have been mapped in many different populations and environments. The objective of the paper was to investigate epistatic effects and QE interaction effects of QTLs for protein content by mixed linear model. QTLs for soybean protein content were detected in a five-year experiment with the recombination inbred lines (RIL) population derived from a cross between Charleston and Dongnong 594. Ten QTLs with additive effects for protein content were mapped in the linkage groups B2, C2, D1a, E and N, one of which was the positive effect contributed by Charleston, the others of which were the negative effects donated by Dongnong 94. Fifteen QTLs pairs with epistatic effects for protein content in the RIL were detected, accounting for 13.57% of the general phenotypic variation. There existed interaction between 9 QTLs and environment, and the general contribution to protein content was 4.47%.

Key words: Soybean, Protein content, Mixed linear model, QTL×environment interaction, Epistatic effects

[1]Song Q J, Marek L F, Shoemaker R C, Lark K G, Concibido V C, Delannay X, Specht J E, Cregan P B. A new integrated genetic linkage map of the soybean. Theor Appl Genet, 2004, 109: 122–128
[2]Wu X-L(吴晓雷), Wang Y-J(王永军), He C-Y(贺超英), Chen S-Y(陈受宜), Gai J-Y(盖钧镒), Wang X-C(王学臣). QTLs mapping of some agronomic traits of soybean. Acta Genet Sin (遗传学报), 2001, 28(10): 947–955(in Chinese with English abstract)
[3]Brummer E C, Graef G L, Orf J, Wilcox J R, Shoemaker R C. Mapping QTL for seed protein and oil content in English soybean population. Crop Sci, 1997, 37: 370–378
[4]Chapman A, Pantalone V R, Ustun A, Allen F L, Landau-Ellis D, Trigiano R N, Gressoff P M. Quantitative trait loci for agronomic and seed quality traits in an F2 and F4:6 soybean population. Euphytica, 2003, 129: 387–393
[5]Hyten D L, Pantalone V R, Sams C E, Saxton A M, Landau-Ellis D, Stefaniak T R, Schmidt M E. Seed quality QTL in a prominent soybean population. Theor Appl Genet, 2004, 109: 552–561
[6]Panthee D R, Pantalone V R, West D R, Saxton A M, Sams C E. Quantitative trait loci for protein and oil concentration, and seed size in soybean. Crop Sci, 2005, 45: 2015–2022
[7]Zhu J(朱军). General genetic models and new analysis methods for quantitative traits. J Zhejiang Agric Univ (浙江农业大学学报), 1994, 20(6): 551–559(in Chinese with English abstract)
[8]Wang D L, Zhu J, Li Z K, Paterson A H. Mapping QTLs with epistatic effects and QTL-environment interactions by mixed linear model approaches. Theor Appl Genet, 1999, 99: 1255–1264
[9]Yuan A-P(袁爱平), Cao L-Y(曹立勇), Zhuang J-Y(庄杰云), Li R-Z(李润植), Zheng K-L(郑康乐), Zhu J(朱军), Cheng S-H(程式华). Analysis of additive and AE interaction effects of QTLs controlling plant height, heading date and panicle number in rice (Oryza sativa L.). Acta Genet Sin (遗传学报), 2003, 30(10) : 899–906 (in Chinese with English abstract)
[10]Li Z-F(李泽福), Zhou T(周彤), Zheng T-Q(郑天清), Luo L-G(罗林广), Xia J-F(夏加发), Zhai H-Q(翟虎渠), Wan J-M(万建民). Analysis of QTL×environment interactions for heading date of rice (Oryza sativa L.). Acta Agron Sin (作物学报), 2002, 28(6): 771–776(in Chinese with English abstract)
[11]Gao Y-M(高用明), Zhu J(朱军), Song Y-S(宋佑胜), He C-X(何慈信), Shi C-H(石春海), Xing Y-Z(邢永忠). Use of permanent F2 population to analyze epistasis and their interaction effects with environments for QTLs controlling heading date in Rice. Acta Agron Sin (作物学报), 2004, 30(9): 849–854(in Chinese with English abstract)
[12]Zhan J-P(张焦平), Jiang L-R(江良荣), Huang J-X(黄建勋), Zhang K(张凯), Wang H-C(王侯聪), Huang Y-M(黄育民). Analysis of epistatic and QE interaction effects of QTL controlling heading date in rice (Oryza sativa L.). Mol Plant Breed (分子植物育种), 2006, 4(3): 351–357(in Chinese with English abstract)
[13]Cao L-Y(曹立勇), Zhan X-D(占小登), Zhuang J-Y(庄杰云), Zheng K-L(郑康乐), Cheng S-H(程式华). QTL mapping and epistasis analysis for yield components in a RIL population of rice (Oryza sativa L. subsp. indica). Sci Agric Sin (中国农业科学), 2003, 36(11): 1241–1247(in Chinese with English abstract)
[14]Wang D-L(王道龙), Zhu J(朱军), Li Z-K(黎志康), Paterson A H. QTLMaper1.6. (2004-12)
[2005-2]. http://ibi.zju.edu.cn/software/qtlmapper/index.htm
[15]Zhang Z-C(张忠臣), Zhan X-L(战秀玲), Chen Q-S(陈庆山), Teng W-L(腾卫丽), Yang Q-K(杨庆凯), Li W-B(李文滨). QTL mapping of seed oil and protein content of soybean. Soybean Sci (大豆科学), 2004, 23(2): 81–85(in Chinese with English abstract)
[16]Jansen R C, Van Ooijien J M, Stam P. Genotype-by-environment interaction in genetic mapping of multiple quantitative trait loci. Theor Appl Genet, 1995, 91: 33–37
[17]Orf J H, Chase K, Jarvik T, Mansur L M, Cregan P B, Adler F R, Lark K G. Genetics of soybean agronomic traits: I. Comparison of three related recombinant inbred populations. Crop Sci, 1999, 39: 1642–1651
[18]Specht J E, Chase K, Macrander M, Graef B L, Chung J, Markwell J P, Germann M, Orf J H, Lark K G. Soybean response to water: A QTL analysis of drought tolerance. Crop Sci, 2001, 41: 493–509
[19]Guo L-B(郭龙彪), Luo L-J(罗利军), Xing Y-Z(邢永忠), Xu C-G(徐才国), Mei H-W(梅捍卫), Wang Y-P(王一平), Zhong D-B(钟代彬), Qian Q(钱前), Ying C-S(应存山), Shi C-H(石春海). Dissection of QTLs in two years for important agronomic traits in rice (Oryza sativa L.). Chin J Rice Sci (中国水稻科学), 2003, 17(3): 211–218(in Chinese with English abstract)
[20]Bao J-S(包劲松), Bao Z-Y(包志毅), He P(何平), Zhu L-H(朱立煌). Detection of QTLs controlling heading date in the process of rice development at two environments. J Zhejiang Univ (浙江大学学报), 2002, 28(1): 27–32(in Chinese with English abstract)
[1] 金昱何, 王雪菲, 徐张一娃, 缪怡宁, 蒋云杰, 伊莹, 缪德麟, 朱静仪, 钟一帆, 陈铭亨, 方芳, 刘鹏. 外源激素对低温胁迫下大豆叶片叶绿素荧光参数及抗氧化酶系统的影响[J]. 作物学报, 2026, 52(6): 1817-1829.
[2] 唐宽强, 李公允, 宋美毅, 赵雪, 常春玲. 大豆株高性状全基因组关联分析及预测模型构建[J]. 作物学报, 2026, 52(6): 1743-1756.
[3] 姚术, 郭凯悦, 翟慧慧, 姚佳慧, 邓文琪, 闫玲, 黄驰, 高阳, 俞嫣然, 赵振邦, 李英慧, 王晓波, 李佳佳. 大豆苗期耐低铁综合评价及优异种质筛选[J]. 作物学报, 2026, 52(5): 1373-1387.
[4] 杨锐, 陈敬东, 黄郢, 张学昆, 周登文, 刘清云, 徐劲松, 谢伶俐, 许本波. 长江下游冬油菜区应对气候变化的育种和栽培策略研究[J]. 作物学报, 2026, 52(4): 1153-1165.
[5] 张晴, 杨昱, 郭茜, 岳霈尧, 殷丛丛, 牛景萍, 赵晋忠, 杜维俊, 岳爱琴. 大豆GmARA6a的克隆及响应盐胁迫的功能分析[J]. 作物学报, 2026, 52(2): 480-493.
[6] 王克晶, 李向华. 我国珍稀的大豆属多年生烟豆和短绒野大豆物种遗传资源濒危性评估分析[J]. 作物学报, 2025, 51(8): 2009-2019.
[7] 孟然, 李赵嘉, 冯薇, 陈悦, 刘路平, 杨春燕, 鲁雪林, 王秀萍. 大豆不同生育时期耐盐性综合评价及耐盐种质筛选[J]. 作物学报, 2025, 51(8): 1991-2008.
[8] 贺红利, 张雨涵, 杨静, 程云清, 赵杨, 李星诺, 司洪亮, 张兴政, 杨向东. 大豆e1-as基因突变体的创制及生理分析[J]. 作物学报, 2025, 51(8): 2228-2239.
[9] 胡蒙, 沙丹, 张晟瑞, 谷勇哲, 张世碧, 李静, 孙君明, 邱丽娟, 李斌. 大豆分枝数QTL定位及候选基因筛选[J]. 作物学报, 2025, 51(7): 1747-1756.
[10] 王琼, 邹丹霞, 陈兴运, 张威, 张红梅, 刘晓庆, 贾倩茹, 魏利斌, 崔晓艳, 陈新, 王学军, 陈华涛. 大豆开花时间和成熟期性状全基因组关联分析与候选基因预测[J]. 作物学报, 2025, 51(6): 1558-1568.
[11] 殷丛丛, 李睿琦, 岳霈尧, 李晨, 牛景萍, 赵晋忠, 杜维俊, 岳爱琴. 基于闭合哑铃介导等温扩增可视化检测大豆花叶病毒SC15方法的建立及应用[J]. 作物学报, 2025, 51(5): 1248-1260.
[12] 许睿, 何妙华, 王昊, 李卫, 任杰, 夏志强. 基于空间转录组技术解析大豆种胚对X射线辐射的响应机制[J]. 作物学报, 2025, 51(12): 3121-3132.
[13] 林洋, 史晓蕾, 陈强, 刘兵强, 杨庆, 于慧娟, 闫龙, 武小霞, 杨春燕. 大豆蛋白质脂肪及脂肪酸组分相关QTL定位[J]. 作物学报, 2025, 51(11): 2899-2910.
[14] 王浩辰, 王克晶, 韩娟, 李向华. 东南沿海短绒野大豆两种代表性生境自然种群的空间遗传结构特征:种群内取样策略研究[J]. 作物学报, 2025, 51(11): 2875-2885.
[15] 李威, 朱玉鹏, 孙宾成, 温有祥, 吴宗声, 徐一帆, 宋雯雯, 徐彩龙, 吴存祥. 转基因大豆结合免耕平作实现东北地区大豆生产轻简化[J]. 作物学报, 2025, 51(10): 2738-2749.
Viewed
Full text


Abstract

Cited

  Shared   
  Discussed   
No Suggested Reading articles found!