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Welcome to Acta Agronomica Sinica,

Table of Content

    12 April 2016, Volume 42 Issue 04
    • CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS
      Cloning and Functional Analysis of a WRKY28-like Gene in Soybean
      WANG Ting-Ting,CONG Ya-Hui,LIU Ju-Ge,WANG Ning,SHUAI Qin,LI Yan,GAI Jun-Yi
      Acta Agron Sin. 2016, 42(04):  469-481.  doi:10.3724/SP.J.1006.2016.00469
      Abstract ( 857 )   RICH HTML    PDF (1489KB) ( 1616 )   Save
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      WRKY transcription factors play important roles in regulating plant growth and development, andparticipate in plant response to abiotic and biotic stresses.Arabidopsis WRKY28 is an essential transcription factor for plant response to necrotrophic pathogen and abiotic stress. To explore the function of the homologues gene of AtWRKY28 in soybean, we cloned GmWRKY28-like (Glyma.14G028900) and performed bioinformatics analysis. Its sub-cellular localization and tissue expression patternswere further investigated. We also analyzed the expression levels of GmWRKY28-like under ABA, PEG and NaCl stress treatments. Our results showed that the coding DNA sequence (CDS) of GmWRKY28-like gene is 1008 bp in length, encoding 335 amino acids. GmWRKY28-like contains a conserved WRKY domainwith22 serine, one threonine and two tyrosine, without any transmembrane domain or signal peptide. Phylogenetic analysis showed that the WRKY28 from Phaseolus vulgariswas most similar to GmWRKY28-like. GmWRKY28-like was verified to be located in the nucleus. This gene expressed at low levels in root and seed while high levels in true leaf, flower and shoot apical meristem. The 1500 bp upstream region of GmWRKY28-like contains a variety of cis-elements, such as MBS, W box, ABRE, and box-W1, which are involved in the response to biotic and abiotic stresses, andits expression was induced by ABA, PEG and NaCl treatments.In addition, overexpressing GmWRKY28-like in Arabidopsis thaliana enhanced plant tolerance to NaCl.This study would provide reference basis to further study the functions of GmWRKY28-like in soybean tolerance to abiotic stresses.

      Identification of Heterotic Loci for Yield and Ear Traits Using CSSL Test Population in Maize
      PENG Qian,XUE Ya-Dong,ZHANG Xiang-Ge,LI Hui-Min,SUN Gao-Yang,LI Wei-Hua,XIE Hui-Ling,TANG Ji-Hua
      Acta Agron Sin. 2016, 42(04):  482-491.  doi:10.3724/SP.J.1006.2016.00482
      Abstract ( 874 )   RICH HTML    PDF (403KB) ( 2018 )   Save
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      Heterosis plays an important role in enhancingcrop yield and quality.Dissecting the genetic basis of heterosis can promote hybrid maize selection, however that is unclear up to now. In this study, a set of chromosome segment substitution lines (CSSLs) population,which was constructed using the inbred line lx9801 as the receptor parent and the inbred line Chang7-2 as the donor parent, was crossed with the inbred line T7296 to construct the corresponding test population. The test population was used to identify the heterotic loci (HL) for grain yield and ear traits in maize,which showed significant difference inheterosisbetween the corresponding chromosomal region of the inbred line Chang7-2 and lx9801as well as the test inbred line T7296. A total of 64HL were identified for gain yield and ear traits, and among them 23 HL were identified at the two environments simultaneously, including 4 HL for ear length, 4 HL for ear width, 4 HL for row number, 7 HL for kernels per row, and 4HL for grain yield. Additionally, the HL for both grain yield and its components simultaneously were found on many chromosomal regions.This study could offer a basic material for thoroughly dissecting the genetic basis of heterosis for grain yield and its components in maize.

      Exploration and Transferability Evaluation of EST-SSRs in Quinoa
      ZHANG Ti-Fu,QI Wi-Cong,GU Min-Feng,ZHANG Xiao-Lin,LI Tan,ZHAO Han
      Acta Agron Sin. 2016, 42(04):  492-500.  doi:10.3724/SP.J.1006.2016.00492
      Abstract ( 794 )   RICH HTML    PDF (393KB) ( 1497 )   Save
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      Quinoa draws more and more attentions from people, since quinoa seed as grain has comprehensive nutrients.But the fundamental research on quinoa just starts and remains in a moderated level. Simple sequence repeat (SSR) development in quinoa will enhance the resource for its genetic analysis. Here,the available RNA based sequencing (RNA-Seq) and expressed sequence tag (EST) data of quinoa deposited in the National Center for Biotechnology Information (NCBI) were engaged in EST-SSR development.Totally,1862 non-mononucleotide EST-SSRswere identified. Among the EST-SSRs, the dinucleotide type was the most abundant (38.3%), and the hexanucleotidewas the minimal(11.7%). The amount of the EST-SSR showed the declined trend along with the increase in its motif nucleotide length. Among 119 EST-SSR primersrandomly chosen for validation,66(55.9%) primers could give clearamplification bandsand 39 showed polymorphismsinfour quinoa accessions.Further analysis showed that the polymorphisms of EST-SSRs had no significant correlation with their motif nucleotide length. In addition, t-test demonstrated that the significant difference of EST-SSRpolymorphismswas not occurredbetween quinoa accessions and otherChenopodiaceae germplasm. These results indicating EST-SSRs developed in quinoa could be transferable in Chenopodiaceous genus and applied in genetic relationship analysis.

      Isolation and Characterization of a Na+/H+Antiporter Gene from Sugarcane
      LIU Feng**,SU Wei-Hua**,HUANG Long,XIAO Xin-Huan,HUANG Ning,LING Hui,SU Ya-Chun,ZHANG Hua,QUE You-Xiong
      Acta Agron Sin. 2016, 42(04):  501-512.  doi:10.3724/SP.J.1006.2016.00501
      Abstract ( 848 )   RICH HTML    PDF (1181KB) ( 1330 )   Save
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      Salt overly sensitive 1(SOS1) gene, encoding a Na+/H+antiport protein, plays an important role in biological processes of plants against salt stress. Using a SOS1 mRNA sequence from Triticum aestivum (KJ563230) as the probe, the homologous ESTs of sugarcanewere obtainedfrom NCBI database. A sugarcane cDNA sequence of SOS1 gene was cloned by in silicocloning combined with RT-PCR,and named as ScSOS1 (GenBank accession number: KT003285). The bioinformatics analysis showed that ScSOS1 has a length of 1403bp witha complete open reading frame (ORF, 107 to 1423 bp), encoding a 423 amino acid residues of sugarcane SOS1 protein with an estimated molecular weight of 47.6 kD and a calculated isoelectric point (pI) of 9.12. The protein of ScSOS1 belongs to a conserved CAP-ED superfamily. Yet the ScSOS1 protein has no signal peptide and belongs to hydrophilic protein with the main function forintermediary metabolism. The mainly secondary structure element of ScSOS1 protein is random coil. Real-time quantitative PCR (RT-qPCR) analysis revealed that ScSOS1was tissue-specificallyexpressed in leaf sheath, bark, pulp, bud and root of sugarcane,with the highest expression in leaf sheath and the lowest in root. Besides,the expression of ScSOS1gene could beregulatedby the treatments of NaCl, PEG, ABA, SA,and MeJA,and up-regulatedby the stresses of NaCland PEG, with the highest inducible expression levels of1.5 times and 4.0 times ashigh as those of control at 24 hours, respectively. This paper suggested that ScSOS1involves in sugarcane tolerance salt and osmotic stresses. It can set up a basis for the elucidation of sugarcane salt resistancemechanism.

      Analysis of DNA Methylation Patterns in Resynthesized Brassica napus and Diploid Parents
      XIE Tao,RONG Hao,JIANG Jin-Jin*,KONG Yue-Qin,RAN Li-Ping,WU Jian,WANG You-Ping
      Acta Agron Sin. 2016, 42(04):  513-524.  doi:10.3724/SP.J.1006.2016.00513
      Abstract ( 736 )   RICH HTML    PDF (1388KB) ( 1246 )   Save
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      The genetic background of Brassica napus, one of the most important oil crops in China, is relatively narrow due to the short history of its polyploid origin. Resynthesized B. napus provides an optimal model for researches on plant polyploidization. In the present study, we compared the DNA methylation levels in synthesized B. napus (F1 generation) and diploid parents using high-performance liquid chromatography (HPLC) and DNA methylation-sensitive amplification polymorphism (MSAP) analysis. HPLC analysis indicated methylation rates of 8.33% and 15.88% in B. rapa and B. oleracea, respectively. While the methylation rate of two hybrids was 10.29% and 12.83%, which werein-between of the parents’values. MSAP analysis proved the different methylation levels in F1 generation and diploids, with the lowest and highest methylation levels identified in B. rapa and B. oleracea, respectively.Variance of the DNA methylation in F1was 23.71%, among which 6.60% and 10.16% were inherited from A and C genome, respectively. Sequence analysis of MSAP polymorphic fragments indicated genes involved in multiple molecular functions were changed during polyploidization. Expression analysis of these genes agreed to the corresponding methylation changes. This study provides preliminary basis for understanding epigenetic variations during B. napus polyploidization.  

      Correlation Analysis between Total Catechins (or Anthocyanins) and Expression Levels of Genes Involved in Flavonoids Biosynthesis in Tea Plant with Purple Leaf
      ZHOU Tian-Shan,WANG Xin-Chao,YU You-Ben,XIAO Yao,QIAN Wen-Jun,XIAO Bin,YANG Ya-Jun
      Acta Agron Sin. 2016, 42(04):  525-531 .  doi:10.3724/SP.J.1006.2016.00525
      Abstract ( 984 )   RICH HTML    PDF (975KB) ( 1038 )   Save
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      Flavan-3-ols (aka catechins) and Anthocyanins found in large amounts in tea plant with purple leaf are synthesized through flavonoids metobolic pathway. To investigate the metobolic flux of flavanoids biosynthetic pathway in tea plant with purple leaf, we employed a tea plant with purple leaf and a tea plant with green leaf both from Mei-Tang-Tai-Cha, to examine the expression profiles of related genes involved in flavonoids biosynthesis intensively and determine the concentrations of catechins and anthocynin. Then correlation between total catechin (or anthocyanin) and expression levels of related genes was analyzed. The results indicated that the expression levels of related genes (PAL, CHS, CHI, F3H, DFR, ANS, ANR1, ANR2, F3’H,and F3’5’H) were up-regulated in purple leaves as compared with those in the green leaves. The purple leaf also had higher concentration of anthocyanin than the green leaf, while the green leaf was richer in total catechines. In purple leaves, the expression levels of related genes (except LAR) were highly correlated with both concentrations of total catechines (r = 0.84–0.99) and anthocyanin(r = 0.72–1.00). By contrast, there was only a high correlation between the expression levels of related genes (except LAR and F3¢H) and the concentration of total catechines (r = 0.64–0.77) in green leaves.

      DNA Methylation Dynamic Analysis of Self Compatible Line and Self-Incompatible Line of Brassica oleracea var. acephala at Seed Germination Stage
      ZHANG Yang,HU Zhong-Ying,ZHAO Yue-Ming,LI Na,XIE Li-Nan
      Acta Agron Sin. 2016, 42(04):  532-539.  doi:10.3724/SP.J.1006.2016.00532
      Abstract ( 851 )   RICH HTML    PDF (253KB) ( 1085 )   Save
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      The seed of self-incompatible line often degraded. This studyaims to clarify the relationship between the degradation of the seeds and methylation. In this experiment, methylation sensitive amplification polymorphism (MSAP) was used to study the status and patterns of the DNA methylation at different periods in seed germination of self-incompatible line 9# and self-compatible line 14#.The improved CTAB method is adopted to extract seed germination in different periods of DNA, and then through the MSAP analysis, statistical amplification bands, compare the differences between 9# and 14#. The results are shown as follows: DNA methylation modification throughout the whole process of seed germination of 9#, at the early stage of the germination (0 to 2 days) methylation sites continued to increase; at the later stage (2 to 8 days) demethylation increased apparently, and eventually the number of demethylation was 11 times more than methylation. It was proved that DNA methylation modification was an important way to regulate the gene expression during seed germination of self-incompatible line 9#. Self-incompatible line 9# and self-compatible line 14# had different DNA methylation status clearly at the respectively periods of 0 and 2 days after seed germination.The proportion of total methylation, full-methylation and semi-methylation of 9# was all higher than of 14# at the same period. As seedings continued to grow after germination, in 9#, the proportion of full-methylation increased clearly and almost that of semi-methylation did not change, while in 14#, the proportion of semi-methylation increased clearly and almost that of full-methylation did not change.

      TILLAGE & CULTIVATION·PHYSIOLOGY & BIOCHEMISTRY
      A Dynamic Model and Its Characteristics Analysis for Nitrogen Accumulation after Heading in Yongyou 538
      WEI Huan-He,MENG Tian-Yao,LI Chao,ZHANG Hong-Cheng,SHI Tian-Yu,MA Rong-Rong,WANG Xiao-Yan,YANG Jun-Wen,DAI Qi-Gen,HUO Zhong-Yang,XU Ke,WEI Hai-Yan,GUO Bao-Wei
      Acta Agron Sin. 2016, 42(04):  540-550.  doi:10.3724/SP.J.1006.2016.00540
      Abstract ( 903 )   RICH HTML    PDF (341KB) ( 715 )   Save
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      A field experiment was conducted using indica/japonica hybrid super rice Yongyou 538 as the material, conventional japonica rice Zhendao 18 and hybrid indica rice Zhongzheyou 1 as the check to study the characteristics of nitrogen accumulation after heading and compare the differences in characteristics of nitrogen accumulation after heading in different types of rice variety. Results followed that, on an average across two years, grain yield of Yongyou 538 was 12.5 t ha-1, significantly higher than that of check varieties. Nitrogen accumulation at heading, at maturity, and from heading to maturity showed a trend of Yongyou 538>Zhendao 18>Zhongzheyou 1. Nitrogen absorption of 100 kg seeds of Zhendao 18 was the highest, followed by Zhongzheyou 1, and Yongyou 538, while opposite trends was observed for N partial factor productivity. Compared with the check, nitrogen output from stem and nitrogen increase in panicle of Yongyou 538 were consistently higher. Nitrogen accumulation in Yongyou 538 and Zhendao18 was both higher than that of Zhongzheyou 1 after heading, and Richards' equation was fit to simulate the relationship between nitrogen accumulation and days after heading for three types of rice variety (R2≥0.995). Maximum rate of nitrogen accumulation, mean rate of nitrogen accumulation, and days to maximum rate of nitrogen accumulation after heading in Zhendao 18 were the highest, while those in Yongyou 538 were the lowest. Effective nitrogen accumulation duration showed a trend of Yongyou 538> Zhendao 18>Zhongzheyou 1. Duration days, nitrogen accumulation rate, and nitrogen accumulation in early and late stage of Zhendao 18 were the highest, while those of Yongyou 538 were the lowest. Duration days and nitrogen accumulation in middle stage of Yongyou 538 was consistently higher compared with the check. Our results indicated that greater nitrogen uptake of Yongyou 538 was mainly occurred in the middle stage, which was 86.1% of the nitrogen accumulation from heading to maturity. And higher nitrogen uptake in middle stage after heading of Yongyou 538 was mainly attributed to the longer duration days in this stage.

      Effects of the Mutant with Low Chlorophyll Content onPhotosynthesis and Yield in Rice
      GU Jun-Fei*,ZHOU Zhen-Xiang,LI Zhi-Kang,DAI Qi-Xing,KONG Xiang-Sheng,WANG Zhi-Qin,YANG Jian-Chang
      Acta Agron Sin. 2016, 42(04):  551-560.  doi:10.3724/SP.J.1006.2016.00551
      Abstract ( 1343 )   RICH HTML    PDF (3842KB) ( 1485 )   Save
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      A chlorophyll-deficit rice mutant (YL) with ~51% chlorophyll of its wild type (WT) was 3.7%, 20.4%, and 39.1% higher in photosynthesisthan WT under saturating light condition,in treatments of0 kg N ha-1, 120 kg N ha-1, 240 kg N ha-1, respectively. In the field and pot experiments, we studied leaf Rubisco content, stomatal conductance, expression levels of aquaporin genes, chlorophyll fluorescence, light and electron micrographs at different levels of N application. The results showed that the decreased level of chlorophyll content in YL was compensated by a relativelyhigher quantum yield of PSII. The electron micrographs of chloroplasts showed that there were no differences in chloroplast development between YL and WT. The stomatal conductance was much higher in the mutant than in wild type, and expression levels of the aquaporin genes suggested a higher mesophyll conductance in YL. The higherCO2 conductance together with a higher Rubisco content in YL could be reasons for the higher photosynthetic rate. The yield of YL was similar to that of WT, but the growth duration in YL was much shorter, which could be caused by the different photosynthetic performance between YL and WT. All these results implicate that higher photosynthetic rate doesnot necessitate higher chlorophyll content. Moderate chlorophyll content will benefit the leaf photosynthesis. Decreasing N investment in chlorophyll synthesis and optimizing N distribution among different photosynthetic compounds could potentially improve photosynthesis and yield. The YL material used in this study could be potentially used to improve photosynthetic efficiency in breeding programmes.

      Effects of Ethylene-Chlormequat-Potassium on Characteristics of Leaf Senescence at Different Plant Positionsafter Anthesis under Different Planting Densities
      LU Lin,DONG Zhi-Qiang*,DONG Xue-Rui,LI Guang-Yan
      Acta Agron Sin. 2016, 42(04):  561-573.  doi:10.3724/SP.J.1006.2016.00561
      Abstract ( 830 )   RICH HTML    PDF (853KB) ( 1275 )   Save
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      In order to explore the effects of ethylene-chlormequat-potassium(ECK) on leaf aging and early senescence in summer maize, and provide a theoretical basis for high and stable yields of summer maize under high planting density by chemical regulation technology in North China Plain,a field experimentwas conducted using two types of maize hybrids (Zhongdan909 and Xundan20)with treatments of