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Table of Content

    12 June 2023, Volume 49 Issue 6
    • REVIEW
      Types and ratios of starch granules in grains and their roles in the formation and improvement of wheat quality properties
      GAO Xin, GUO Lei, SHAN Bao-Xue, XIAO Yan-Jun, LIU Xiu-Kun, LI Hao-Sheng, LIU Jian-Jun, ZHAO Zhen-Dong, CAO Xin-You
      Acta Agronomica Sinica. 2023, 49(6):  1447-1454.  doi:10.3724/SP.J.1006.2023.21065
      Abstract ( 534 )   HTML ( 74 )   PDF (257KB) ( 622 )   Save
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      Wheat flour is mainly composed of protein and starch. Gluten, especially the high-molecular-weight glutenin subunit, is the key factor determining the dough quality which has been widely accepted by breeders. However, the contribution of starch composition and physicochemical properties to dough quality has not been paid enough attention. Wheat starch has a bimodal size distribution and it is composed of A-type starch granules (diameter more than 10 μm) and B-type starch granules (diameter no more than 10 μm) according to the particle size. There are differences in the physicochemical properties of different types of starch granules. Therefore, the particle size distribution of starch affects the physicochemical properties of the total wheat starch, the gluten network structure, and the gluten-starch interaction of gluten, and finally affects the dough rheological properties, and processing characteristics. In summary, from a view of starch particle distribution, this article reviewed the development and regulation mechanism, physicochemical properties of A- and B-type starch granules, and their contribution to quality and yield. Strategies for future wheat breeding were proposed, that is, the starch properties should be selected and improved. The germplasm with high B-type starch granules proportion and strong gluten-starch interaction should be screened for further utilization. The objective of this study is to provide a reference for breeding the new high-quality and strong-gluten wheat varieties.

      CROP GENETICS & BREEDING·GERMPLASM RESOURCES·MOLECULAR GENETICS
      Development of specific oligonucleotide probe library of Aegilops comosa and construction of oligo-FISH karyotype
      SHI Pei-Yao, CHEN Li-Juan, SUN Hao-Jie, CHENG Meng-Hao, XIAO Jin, YUAN Chun-Xia, WANG Xiu-E, WANG Hai-Yan
      Acta Agronomica Sinica. 2023, 49(6):  1455-1465.  doi:10.3724/SP.J.1006.2023.21048
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      Ae. comosa (Aegilops comosa, 2n=2x=14, MM) is a tertiary gene bank for wheat improvement. In order to accurately identify the chromosomes of Ae. comosa M genome or the chromosome segments transferred into wheat, the next-generation sequencing information of Ae. comosa M genome were obtained. Based on the next-generation sequencing information of Ae. comosa M genome, 12 oligonucleotide probes were designed for oligo-FISH analysis according to the 16 possible specific satellite repeats identified. The oligo-FISH results showed that ten of the probes could produce obvious hybridization signals on the chromosomes of Ae. comosa. The probe specificity analysis revealed that the five probes generated hybridization signals on the chromosomes of Ae. comosa, but there was no obvious hybridization signal on the chromosomes in wheat, which used as the specific probes to identify the chromosomes or chromosome segments of M genome in wheat background. Three probes (oligo-pAc89, oligo-pAc148, and oligo-pAc225) with abundant signal distribution on the chromosomes of Ae. comosa were selected to form a probe set named ONPS#AC1. Combined with the oligonucleotide probe library developed according to wheat D sub genome, the oligo-FISH karyotype of Ae. comosa was constructed, which can accurately identify each chromosome of the M genome, providing an important molecular cytogenetic basis for mining, transferring, and utilizing the excellent genes of Ae. comosa.

      Ubiquitin receptor protein OsDSK2b plays a negative role in rice leaf blast resistance and osmotic stress tolerance
      DING Jie-Rong, MA Ya-Mei, PAN Fa-Zhi, JIANG Li-Qun, HUANG Wen-Jie, SUN Bing-Rui, ZHANG Jing, LYU Shu-Wei, MAO Xing-Xue, YU Hang, LI Chen, LIU Qing
      Acta Agronomica Sinica. 2023, 49(6):  1466-1479.  doi:10.3724/SP.J.1006.2023.22039
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      The ubiquitin receptor protein DSK2 (dominant suppressor of KAR2) plays an important role in the growth, development, and stress tolerance in plant, but its role in rice disease resistance and osmotic stress has not been reported yet. In this study, we identified that OsDSK2b was regulated by various stresses, and the relative expression level of this gene decreased significantly after Magnaporthe oryzae infection and 20% PEG-6000 treatment. The spatio-temporal expression analysis showed that the relative expression level of OsDSK2b was highest at three-leaf seedling stage. The subcellular localization analysis demonstrated that OsDSK2b was localized in the cytoplasm in rice protoplast. The lesion area of OsDSK2b knockout plants was about 0.05 cm2 and 0.10-0.13 cm2, which was much smaller than wild-type plants (0.24 cm2 and 0.31 cm2) after inoculation with Magnaporthe oryzae (GD08-T13 and Guy11). Compared with wild-type plants, knockout of OsDSK2b significantly enhanced the leaf blast resistance in rice, and the relative expression levels of pathogenesis-related protein (PR) genes were induced significantly in OsDSK2b knockout plants after Magnaporthe oryzae (Guy11) infection. The knockout of OsDSK2b also significantly enhanced the osmotic stress tolerance in rice. OsDSK2b knockout plants had higher survival rate (58.3%-74.0%) than wild-type plants (17.0%) after 20% PEG-6000 treatment. Meanwhile, compared with wild-type plants, OsDSK2b knockout plants had lower ion permeability and water loss rate after 20% PEG-6000 treatment. Scanning microscopy revealed that knockout of OsDSK2b could promote the stomatal closure both before and after 20% PEG-6000 treatment, and the promotion effect was stronger after osmotic stress treatment. In addition, qRT-PCR results showed that the relative expression level of DREB genes and abscisic acid (ABA) synthesis or pathway-related genes were significantly higher in OsDSK2b knockout plants than wild-type plants after osmotic stress treatment. The endogenous ABA contents of ko6 and ko14 knockout plants were 314.2 ng g-1 and 344.4 ng g-1, respectively, which were significantly higher than wild-type plants (206.8 ng g-1). These results indicated that OsDSK2b could regulate rice osmotic stress through both the ABA-dependent and ABA-independent pathways. This study provides a new candidate gene for the breeding of rice resistant varieties by analyzing the regulatory role of OsDSK2b in rice coping with biotic and abiotic stresses.

      Genome-wide identification and characterization of MAPK genes and their response to biotic stresses in foxtail millet
      LIU Jia, ZOU Xiao-Yue, MA Ji-Fang, WANG Yong-Fang, DONG Zhi-Ping, LI Zhi-Yong, BAI Hui
      Acta Agronomica Sinica. 2023, 49(6):  1480-1495.  doi:10.3724/SP.J.1006.2023.24113
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      MAPK plays an important role in plant growth and development regulation, biotic and abiotic stress responses, and hormone signal transduction. In order to elucidate the biological function of the SiMPK genes in foxtail millet, we identified the SiMPK family members in the genome and analyzed the distribution, structure, evolution, and its expression characteristics in response to different stresses. In this study, the SiMPK gene family members were identified in the genome-wide level using the amino acid sequences of conserved domains and specific TXY motifs of MAPK proteins between foxtail millet and rice. The protein physicochemical property, phylogenetic evolution, chromosome distribution, gene structure, protein conserved motif, promoter cis-acting regulatory elements, and collinearity were analyzed. The relative expression patterns of SiMPK genes in the different tissue, under the biotic stresses of Uromyces setariae-italicae Yoshino and Ostrinia furnacalis and with different hormone treatments were analyzed by qRT-PCR. The results showed that a total of 15 SiMPK genes were identified, and the encoded proteins contained 220-611 amino acids, the relative molecular weight ranged from 25.77 kD to 69.63 kD, and the isoelectric point ranged from 5.46 to 9.34. Phylogenetic analysis showed that SiMPK genes were divided into four groups. Group A, B, and C contained TEY motifs, and group D contained TDY motifs. SiMPK genes were distributed on chromosomes 1, 3, 4, 5, 8, and 9, and contained 3-11 exons. All SiMPK proteins contained motif 1 and motif 2. A number of cis-acting elements related to stress, hormones and plant growth and development were predicted in the promoter regions of the SiMPK genes. Most genes had obvious tissue expression specificity. Except for SiMPK21-2 and SiMPK6, the other members had obvious responses to 1 to 3 kinds of stresses, such as Uromyces setariae-italicae Yoshino infection, Ostrinia furnacalis feeding, and SA and MeJA treatments. The results laid a theoretical foundation for further research on the function of SiMPK genes in the biotic stresses of disease and pest in foxtail millet.

      Identification and expression analysis of nitrate transporter NRT gene family in upland cotton (Gossypium hirsutum L.)
      MA Chun-Min, LI Wei-Xi, LI Fang-Jun, TIAN Xiao-Li, LI Zhao-Hu
      Acta Agronomica Sinica. 2023, 49(6):  1496-1517.  doi:10.3724/SP.J.1006.2023.24159
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      Nitrate transporters (NRTs) play an important role in plant nitrogen absorption, utilization, and storage. In this study, 106 GhNRT1/PTR (NPF) (Nitrate transporter 1 (NRT1)/Peptide Transporter (PTR) family (NPF)) and 14 GhNRT2 (Nitrate transporter 2 family) were identified from Gossypium hirsutum L. (TM-1) by HMM software and Blastp method. The conserved domains, phylogenetic relationships, physicochemical properties, subcellular localization, conserved motifs, gene structure, promoter cis-acting elements, and expression patterns of these GhNRTs were analyzed. The results showed that GhNPF had a typical PTR2 (Peptide Transporter 2 family) domain. Two PTR2 and/or other domains were found in individual proteins (GhNPF2.6bD, GhNPF4.1cA, and GhNPF2.14aD), indicating that GhNPF was less evolutionarily conserved. The GhNRT2 had a typical MFS_1 (Major Facilitator Superfamily) domain. Most proteins were located on the cytoplasmic membrane with hydrophobic properties. Phylogenetic analysis showed that these GhNRTs could be divided into 10 groups, and the same group had similar gene structure and motif distribution. The composition of cis-acting elements indicated that the relative expression levels of most GhNRTs could be related to plant hormones, abiotic stress, and light response. In addition, the relative expression patterns of GhNPF were different among the diverse subgroups, but the relative expression patterns of different members in the same subgroup were mostly conserved. GhNRT2 genes were mainly expressed in roots. Moreover, the transcriptome data with salt stress treatment revealed that the relative levels of nearly 1/5 GhNRTs were significantly up-regulated or down-regulated, indicating that they probably function in response to salt stress. Six GhNRTs were selected to detect the response of their expression in roots, young leaves, functional leaves, and old leaves to different NO3- supply levels. The results showed that GhNPF6.3dA and GhNPF7.3aA may have the ability to absorb NO3- with dual affinity, while GhNPF6.2bD may encode high-affinity NO3- transporter. The three may be involved in NO3- unloading in functional leaves and old leaves. These results were different from those reported in plants such as Arabidopsis. In conclusion, the results provide a reference for further functional characterization of nitrate transporters and provide a preliminary basis for the mechanism analysis of nitrogen absorption and utilization in cotton.

      Effects of BnMAPK2 on drought tolerance in Brassica napus
      YUAN Da-Shuang, ZHANG Xiao-Li, ZHU Dong-Ming, YANG You-Hong, YAO Meng-Nan, LIANG Ying
      Acta Agronomica Sinica. 2023, 49(6):  1518-1531.  doi:10.3724/SP.J.1006.2023.24153
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      The mitogen-activated protein kinase (MAPK) cascade is involved in various biotic and abiotic stress responses in plants. BnMAPK2 belongs to the most downstream C-family genes in the MAPK cascade pathway. In this study, BnMAPK2 overexpression (OE-MAPK2) and RNA interference expression (RNAi-MAPK2) transgenic Brassica napus were successfully obtained. Under drought conditions, the drought tolerance of OE-MAPK2 plants was increased, and the drought tolerance of RNAi-MAPK2 plants was decreased. The related physiological indicators showed that under drought stress BnMAPK2 could slow down the degree of leaf dehydration, promote the accumulation of proline in plants, reduce the content of malondialdehyde, and increase the activity of POD at the later stage of drought. We compared the differences in the relative expression levels between transgenic and wild-type plants in the drought-related genes (P5CSB, SCE1), BnMAPK2-interacting drought-related genes (STRS2, CRL1), and STRS2-dependent ABA signaling pathway-related genes (RD22, MYC, SnRK2). The results showed that BnMAPK2 positively regulated the relative expression levels of P5CSB, SCE1, CRL1, RD22, MYC, and SnRK2, negatively regulated the relative expression levels of STRS2, and the relative expression trends of genes related to STRS2-dependent ABA signaling pathway in OE-MAPK2 plants and strs2 mutants were consistent. Therefore, it was speculated that BnMAPK2 can increase plant drought tolerance by regulating the in vivo permeability, leaf water content, cell membrane and protein structure stability, scavenging free radicals, and reducing membrane lipid peroxidation, which can also negatively regulate STRS2 by interacting with STRS2. The relative expression of the genes mediated the STRS2-dependent ABA signaling pathway and increased the drought tolerance of plants. This study lays a foundation for further elucidating the anti-stress mechanism of BnMAPK2 gene.

      Mapping soybean protein QTLs based on high-density genetic map
      LIU Ting-Xuan, GU Yong-Zhe, ZHANG Zhi-Hao, WANG Jun, SUN Jun-Ming, QIU Li-Juan
      Acta Agronomica Sinica. 2023, 49(6):  1532-1541.  doi:10.3724/SP.J.1006.2023.24121
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      Soybean is an important food crop and economic crop, and its grain protein is about 40%, which is one of the main sources of high-quality vegetable protein. Mining the quantitative trait loci (QTL) that control soybean high protein and molecular marker breeding are of great significance for the breeding of high protein soybean. In this study, a recombinant inbred line population consisting of 192 lines constructed by crossing Zhonghuang 35 (ZH35) and Zhonghuang 13 (ZH13) with significant differences in protein content was used as the experimental materials. A high-density genetic map containing 4879 bin markers was constructed with the total genetic distance of 3760.71 cM and the genetic distance between adjacent markers of 0.77 cM by resequencing the two parents and the RIL population. The RIL population and its parents were grown in Shunyi, Beijing and Puyang, Henan, respectively. A total of 15 protein content-related QTL loci were detected in the two environments, which were distributed on chromosomes 5, 12, 15, 17, 18, 19, and 20, respectively. The contribution rate was 4.36%-11.39%, among which, qPro-20-1 and qPro-20-3 were detected in Shunyi, Beijing and Puyang, Henan, respectively. The contribution rates of the two QTLs were 7.65% and 7.58%, respectively, and the overlapping regions included 33 genes. This study is helpful for fine mapping and map-based cloning of soybean protein content-related genes, and provides genetic resources for further breeding of high-protein soybean varieties.

      Application of host-induced gene silencing interfering with Sclerotinia sclerotiorum pathogenic gene OAH in Brassica napus resistance to Sclerotinia sclerotiorum
      YANG Yi-Dan, HE Du, LIU Jing, ZHANG Yan, CHEN Fei-Zhi, WU Yan-Fei, DU Xue-Zhu
      Acta Agronomica Sinica. 2023, 49(6):  1542-1550.  doi:10.3724/SP.J.1006.2023.24126
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      Rapeseed is the largest oil crop in China, and Sclerotinia sclerotiorum is one of the main diseases of rapeseed in China. In this experiment, to study the effect of HIGS-mediated SsOAH gene silencing on the resistance to S. sclerotiorum in Brassica napus, the interference fragment of the key pathogenic gene SS1G_08218 (OAH) in S. sclerotiorum was transformed into Brassica napus by HIGS technique, and the transgenic plants containing siRNA were obtained. The results of disease resistance identification after inoculation with S. sclerotiorum showed that the resistance of SS.OAH.RNAi transgenic rapeseed plants to S. sclerotiorum was enhanced, and the relative expression levels of OAH genes in S. sclerotiorum mycelia of R18, R25, and R36 lines were lower than wild type, indicating that siRNA was successfully expressed in transgenic rapeseed. The lesion size of S. sclerotiorum cultured on the medium supplemented with transgenic rapeseed leaf extract was significantly smaller than wild type, which decreased by 35.29%, 21.98%, and 31.53% respectively. The mycelium grew slowly, the expansion length was shorter, the branches were few, and the growth was abnormal. After inoculating it into normal wild type rapeseed, its pathogenicity decreased significantly. After inoculating the transgenic rapeseed leaves with S. sclerotiorum, it was observed that the mycelium expansion on the leaves was sparse, the growth was blocked, and the infection pad formation was inhibited, suggesting that the interference fragments expressing OAH gene in rapeseed affected the mycelium growth and expansion. Compared with the wild type, the content of oxalic acid in the lesion tissue of transgenic rapeseed was 391 μg g-1 and 446 μg g-1 at 36 hpi and 48 hpi, which decreased 54 μg g-1 and 32 μg g-1, respectively. This study showed that the interference fragment expressing S. sclerotiorum OAH in rapeseed could reduce the accumulation of oxalic acid during S. sclerotiorum infection and enhance the resistance level of transgenic rapeseed to S. sclerotiorum. In this experiment, HIGS technique was used to improve resistance to S. sclerotiorum by transforming interference fragments of OAH gene in rapeseed, and to provide a theoretical basis and germplasm resources for breeding S. sclerotiorum resistant varieties.

      Identification and evaluation of salt-alkali tolerance and screening of salt-alkali tolerant germplasm of oat (Avena sativa L.)
      ZHANG Jing, GAO Wen-Bo, YAN Lin, ZHANG Zong-Wen, ZHOU Hai-Tao, WU Bin
      Acta Agronomica Sinica. 2023, 49(6):  1551-1561.  doi:10.3724/SP.J.1006.2023.21032
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      Affected by climate change and human production activities, the world’s salt-alkali land is expanding, and soil salinization has become an important factor limiting the development of agricultural production. Oat is a crop with the strong saline-alkali tolerance. To evaluate the salinity tolerance of oat germplasm resources in China, 485 accessions were stress treated with 125 mmol L-1 NaCl, Na2SO4, and NaHCO3 (1:1:1 molar concentration) solution at germination stage. Eight growth indexes, including germination potential, germination rate, root length, bud length, root fresh weight, bud fresh weight, root dry weight, and bud dry weight, were identified at the germination stage of oats. A comprehensive evaluation and screening of oat germplasm resources for salt-alkali tolerance was performed by the correlation analysis, principal component analysis, membership function analysis, and cluster analysis. The results showed that salt-alkali inhibited all eight indexes identified, and a significant positive correlation was observed between the affiliation function values of the indexes under salt-alkali tolerance and with the comprehensive evaluation value. Eight evaluation indexes were converted into two comprehensive indexes by principal component analysis, with a cumulative variance contribution of 76.926%. The membership function analysis combined with cluster analysis screened a total of two oat accessions with high salt-alkaline tolerance (Oat 1606 and Heikowski 596) and classified 485 accessions into five classes, including two highly saline-alkaline tolerance, 49 salt-alkaline-tolerant accessions, 147 medium saline-alkaline tolerance accessions, 129 sensitive saline-alkaline accessions, and 158 high saline-alkaline sensitive accessions. The results of correlation analysis, principal component analysis, and stepwise multiple regression analysis, and the bud length was screened as the preferred indicator for the screening of salt-alkali tolerance in germinating oats, followed by root fresh weight, bud fresh weight, germination potential, and germination rate, which were also important indexes for the comprehensive evaluation and screening of salt-alkali tolerance in germinating oats.

      Multi-locus genome-wide association study and prediction for general combining ability of maize ear length
      MA Juan, ZHU Wei-Hong, LIU Jing-Bao, YU Ting, HUANG Lu, GUO Guo-Jun
      Acta Agronomica Sinica. 2023, 49(6):  1562-1572.  doi:10.3724/SP.J.1006.2023.23042
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      Ear length is an important agronomic trait, which is closely related with yield. General combining ability (GCA) is an important index to evaluate excellent inbred lines. Therefore, the dissection of genetic basis of ear length GCA and formulation of corresponding breeding strategies is of great significance to improve maize yield. In this study, 537 F1 hybrids as the experimental materials were obtained from 123 maize inbred lines and eight tester lines according to North Carolina II genetic mating design, and phenotyped under two environments. A total of 11,734 single nucleotide polymorphisms (SNPs) identified using the maize 5.5 K liquid breeding chip were used to conduct multi-locus genome-wide association study (MGWAS) and genomic prediction for ear length GCA in two environments and combined environment. A total of 11 SNPs significantly associated with ear length GCA were detected using seven MGWAS, and the variation of GCA effect explained by a single locus was 8.06%-28.23%. Five SNPs were co-located using different MGWAS. Locus 7_178103602 was repeatedly detected using mrMLM (multi-locus random-SNP-effect mixed linear model) in Zhoukou and combined environment, explaining 26.02%-28.23% of variation of ear length GCA, which was an environment-stable and major-effect SNP. 11 candidate genes were identified, among which auxin amido synthetase 9 and EID1-like F-box protein 2 may be key genes for GCA of ear length. The accuracy of five random effect models for predicting ear length GCA ranged from 0.53 to 0.69 in the three environments, and there were minor differences among these models. In Xinxiang and Zhoukou environments, GBLUP (genomic best linear unbiased prediction) and RKHS (reproducing kernel Hilbert space) incorporating different significant loci as fixed effects could improve the accuracy of genomic estimated breeding value for GCA of ear length, with a percentage increase of 2.34%-14.98%. In the combined environment, except that the accuracy was slightly reduced using one significant locus derived from FarmCPU (fixed and random model circulating probability unification) or BLINK (Bayesian-information and linkage-disequilibrium iteratively nested keyway) as fixed effects, the addition of significant loci derived from the other two MGWAS methods could improve the genomic prediction ability, with a percentage increase of 2.80%-6.84%. Therefore, the incorporation of significant loci from MGWAS into the prediction models as fixed effects is helpful to improve the accuracy of the genomic estimated breeding value for ear length GCA, which could be used to effectively predict and select GCA of maize parental ear length.

      Biological functional analysis of common buckwheat (Fagopyrum esculentum) FeSGT1 gene in enhancing drought stress resistance
      ZHU Xu-Dong, YANG Lan-Feng, CHEN Yuan-Yuan, HOU Ze-Hao, LUO Yi-Rou, XIONG Ze-Hao, FANG Zheng-Wu
      Acta Agronomica Sinica. 2023, 49(6):  1573-1583.  doi:10.3724/SP.J.1006.2023.21028
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      SGT1 (Suppressor of the G2 Allele of skP1) is an inhibitor of skp1-4, which plays an important role in the abiotic stress response of plants. Based on the early transcriptomics and proteinomics analyses of common buckwheat under drought stress, a FeSGT1 gene was screened and cloned, which contained a 1086 bp open reading frame encoding 361 amino acids and 3 domains including TPR, CS, and SGS. Homologous protein comparison showed that FeSGT1 was closely related to CqSGT1 (XP_021726759.1), BvSGT1 (XP_010671588.1), and SoSGT1 (XP_021839743.1). Besides, FeSGT1 gene encoded membrane localization protein. The relative expression levels revealed that FeSGT1 tended to be up-regulated within 24 hours of drought stress. The expression of FeSGT1 gene peaked at 12 hours and began to decline after 24 hours under salt, low temperature (4℃), and ABA treatments. Overexpression of FeSGT1 gene in transgenic Arabidopsis not only conferred drought and salt tolerance, but also significantly increased root length, fresh weight, and survival rate compared with the wild type (WT) plant, accompanied by the elevated activities of catalase (CAT), the lowered malonaldehyde (MDA) and H2O2 contents, thus allowing plants to better adapt to adverse environments. Our results provided information in the exploring of the molecular regulation mechanism responding to drought tolerance in common buckwheat.

      Genetic basis analysis of high-yielding in Yannong wheat varieties
      WANG Hao, SUN Ni-Na, WANG Chu, XIAO Lu-Ning, XIAO Bei, LI Dong, LIU Jie, QIN Ran, WU Yong-Zhen, SUN Han, ZHAO Chun-Hua, LI Lin-Zhi, CUI Fa, LIU Wei
      Acta Agronomica Sinica. 2023, 49(6):  1584-1600.  doi:10.3724/SP.J.1006.2023.21033
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      The Yannong series wheat has the characteristics of high yield potential, disease resistance, and wide adaptability. Yannong 1212, a high-yield and multi-resistant variety approved in recent years, has repeatedly broken the national winter wheat yield record for many times. To date, the numerous varieties derived from Yannong series have been released. Lumai 14 has derived from at least 214 wheat authorized varieties and become an important backbone parent by 2020. This objective of the study is to characterize genetic basis of high yielding potential in Yannong series, identify the key chromosomal segments of high yield and wide adaptability, and provide theoretical reference for the genetic improvement of new wheat varieties. The genotype of 38 Yannong series wheat varieties, some of their derived varieties, and 244 authorized varieties (advanced lines) were scanned by wheat 55K SNP array, and the environmental phenotypes were identified. Phenotype evaluation of yield-related traits of the natural mapping population was conducted in multiple environments. The genetic effects of the common high-frequency co-selected genetic segment (HFCS) of Yannong series varieties were characterized in detail based on the genotypes of wheat 55K SNP array. In addition, the HFCS from Lumai 14 to its derived varieties were also specified. The genetic basis of high yield potential in Yannong 1212 and Lumai 14 were revealed at the whole genome-wide level. The genetic similarity coefficients among the 17 Yannong series authorized varieties ranged from 0.80 to 0.99. Based on genotyping data from the 55K SNP array in the 17 Yannong series authorized varieties, 975 HFCS were obtained, and their segments lengths ranged from 1.00 Mb to 75.18 Mb. Most HFCS were distributed on chromosomes 2D, 4D, 6D, and 7B, with the total length accounting for more than 40% of the corresponding chromosomes, respectively. The genetic contribution rate of Lumai 14 to its 23 derived varieties was approximately 71.45% on average at the genome level, with A, B, and D of 69.63%, 66.04%, and 79.82%, respectively. A total of 430 high-frequency transmission genetic segments (HFTGS) 14 were detected in Lumai derived progency and 265 blocks (61.6%) overlapped with the HFSC in the Yannong series. Lumai 14 was a backbone parents and Yannong 1212 was a novel authorized varieties with high yield potential and wide adaptability. To characterize their genetic basis of high yield and wide adaptability, single marker analysis based on the natural population was performed. The results showed that both Lumai 14 and Yannong 1212 had been enriched in excellent alleles for thousand kernel weight (TKW) and yield per plant (YPP). Approximately 92.3% and 84.4% of the significant loci in the HFTGS of Lumai 14 were shown to increase TKW and YPP, mainly distributing on chromosomes 2A, 2B, 2D, 4A, 5B, 6A, and 7A. Yannong series authorized wheat varieties had enriched in excellent alleles of yield-related genes and QTLs especially for TKW and YPP, which played a key role to their high and stable yielding potential.

      TILLAGE & CULTIVATION·PHYSIOLOGY & BIOCHEMISTRY
      Formation mechanism of yield stability in high-yielding rapeseed varieties
      YU Xin-Ying, WANG Chun-Yun, LI Da-Shuang, WANG Zong-Kai, KUAI Jie, WANG Bo, WANG Jing, XU Zheng-Hua, ZHOU Guang-Sheng
      Acta Agronomica Sinica. 2023, 49(6):  1601-1615.  doi:10.3724/SP.J.1006.2023.24115
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      In crop production, yield stability is as important as high yield. To explore the relationship between main agronomic traits and yield stability and to provide a theoretical basis for large-scale high yield and improved variety breeding of rapeseed, a single factor field experiments of sowing date, nitrogen rate, and planting density were carried out in Wuhan and Lanzhou. The high yielding varieties [Xiangzayou 518 (XZY 518) and Dadi 199 (DD 199)] with different yield stability were used as the materials, the agronomic, physiological indices and the yield of each treatment were measured, and the variation coefficient of each index was calculated. The results showed that: (1) Sowing date, nitrogen rate, and plant density significantly affected the rapeseed yield. There was no significant difference in the maximum yield between two varieties, however there was a significant difference in the yield stability among these treatments. The yield variation coefficients of DD 199 were lower than that of XZY 518 with the strong stability. (2) Compared with XZY518, the indices of leaf area index (LAI), light energy utilization efficiency (LUE), aboveground dry matter accumulation, and root morphology at flowering stage of DD 199 were better, while the variation coefficient of were smaller, which was the basis of high and stable yield. (3) Grey correlation analysis showed that under each treatment, the yield of rapeseed was significantly positive correlated with the population pod number, aboveground dry weight, and average root diameter at flowering stage. In addition, the variation coefficient of population pod number, aboveground dry weight, and average root diameter at flowering stage were significantly positively correlated with the variation coefficient of yield. In conclusion, optimizing the indices such as population pod number, aboveground dry weight, and average root diameter at flowering stage can provide a theoretical support for breeding of rapeseed variety and achieving high yield at large-scale.

      Effects of combined application of nitrogen and phosphorus on yield and leaf senescence physiological characteristics in summer maize
      ZHANG Zhen-Bo, JIA Chun-Lan, REN Bai-Zhao, LIU Peng, ZHAO Bin, ZHANG Ji-Wang
      Acta Agronomica Sinica. 2023, 49(6):  1616-1629.  doi:10.3724/SP.J.1006.2023.23045
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      Nitrogen and phosphorus, as the essential nutrients for maize growth and development, play an important effect on maize yield. In this experiment, to investigate the effect of combined application of nitrogen and phosphorus on leaf senescence physiological and yield formation in summer maize, 11 combined applications of nitrogen and phosphorus treatments in 2020 and 15 combined applications of nitrogen and phosphorus treatments in 2021 were applied using Denhai 111 (DH111) as the test materials. The results showed that the leaf area index (LAI), the relative chlorophyll content (SPAD), and the antioxidant enzyme activities [superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT)] of summer maize increased first and then decreased, and the malondialdehyde (MDA) content decreased first and then increased with the increase of nitrogen application rate under the same phosphorus application conditions. Under N0-N2 conditions, with the increasing phosphorus application, LAI, SPAD value, and antioxidant enzyme activity had an increasing trend, MDA content showed a decreasing trend and yield showed an increasing trend, while with the increasing phosphorus application, LAI, SPAD value, and antioxidant enzyme activity showed an increasing trend and then a decreasing trend, MDA content showed a decreasing trend and then an increasing trend, and yield showed an increasing trend and then a decreasing trend in N3 and N4. In 2020, the N3 P1 treatment increased yields by 2.55% compared to the N2 P3 treatment. In 2021, the N3 P1 treatment increased yields by 7.36% and 3.31% compared to the N3 P0 and N2 P2 treatments, respectively. Under the experimental conditions, the reasonable combined application of nitrogen and phosphorus (180 kg N hm-2, 60 kg P hm-2) treatment can increase the activities of antioxidant enzymes at the later stage of fertility, reduce MDA content, maintain a high leaf area index and SPAD values, increase the number of grains per ear and 1000-grain weight, ultimately leading to higher maize yield.

      Effects of nitrogen fertilizer rates on grain yield and nitrogen use efficiency of japonica-indica hybrid rice cultivar Yongyou 1540 and its physiological bases
      XU Ran, CHEN Song, XU Chun-Mei, LIU Yuan-Hui, ZHANG Xiu-Fu, WANG Dan-Ying, CHU Guang
      Acta Agronomica Sinica. 2023, 49(6):  1630-1642.  doi:10.3724/SP.J.1006.2023.22040
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      The objective of this study is to understand how nitrogen (N) application rates affected on grain yield and N use efficiency (NUE) of japonica-indica hybrid rice cultivar Yongyou-1540 and its physiological bases. In the present study, a japonica-indica hybrid rice cultivar Yongyou 1540, which was widely planted in Zhejiang province was field grown in 2020 and 2021, and four N application rates [0 kg hm-2 (N0), 80 kg hm-2 (N1), 160 kg hm-2 (N2), and 240 kg hm-2 (N3)] were applied during rice growing season. The results indicated that, (1) N application rate had significant effects on grain yield and NUE of rice. Grain yield was significantly increased with the increase of N application rate from 0 kg hm-2 to 160 kg hm-2, and the increase in grain yield was mainly attributed to the increase in total spikelets per unit area. However, there were no significantly difference in grain yield between N2 and N3 treatments, which was mainly due to the reduce in grain filling percentage in N3 treatment. When compared with N2 treatment, N3 treatment significantly reduced N harvest index and NUE, including agronomic N use efficiency (AEN), N recovery efficiency (REN), N partial factor productivity (PFPN), and internal N use efficiency (IEN). (2) N application rate had significant effects on shoot growth and development. Shoot dry weight was significantly increased at jointing, heading, and maturity stages and harvest index was significantly decreased with the increase of N application rate from 0 kg hm-2 to 240 kg hm-2. The net photosynthetic rate of flag leaf, the concentration of zeatin plus zeatin riboside (Z+ZR) in flag leaves, and the activities of key enzymes involved in sucrose-to-starch conversion in grains were significantly increased with the increase of N application rate from 0 kg hm-2 to 160 kg hm-2, however, N3 treatment could not increase or even reduce the above indicators compared with N2 treatment. (3) N application rate had significant effects on rice root morphological and physiological traits. Root dry weight, root dry weight in both 0-10 cm and 10-20 cm soil layers, total root length, root length density, specific root length at jointing, heading, and maturity stages, and root oxidation activity (ROA) and concentration of Z+ZR in both roots and root-bleeding sap at mid- and late grain filling stages were significantly increased with the increase of N application rate from 0 kg hm-2 to 160 kg hm-2. However, when compared with N2 treatment, N3 treatment significantly increased root dry weight, and root dry weight in 0-10 cm soil layer, total root length and root length density. (4) The results of the correlation analysis showed that ROA, and concentration of Z+ZR in roots or in root-bleeding sap, were significantly positively correlated with net photosynthetic rate of flag leaves, the concentration of Z+ZR in flag leaves, and activities of key enzymes involved in sucrose-to-starch conversion in grains. Generally, the appropriate N application rate could improve rice root morphological and physiological traits and promote shoot growth and development, and then improved plant physiological performances during the mid- and late grain filling stages, and finally achieved the due goal of increase both grain yield and NUE.

      Characteristic difference in grain in-field drydown between maize cultivars with various maturation
      LI Lu-Lu, MING Bo, GAO Shang, XIE Rui-Zhi, WANG Ke-Ru, HOU Peng, XUE Jun, LI Shao-Kun
      Acta Agronomica Sinica. 2023, 49(6):  1643-1652.  doi:10.3724/SP.J.1006.2023.23043
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      The grain moisture concentration at harvest stage varies vastly among maize cultivars with various maturities, which is an important factor affecting mechanical grain harvesting and grain quality. Differences in maturation result in various environmental conditions for grain drying in the field, thus increasing the difficulty of comparing the characteristics of grain dehydration between cultivars. Maize cultivars with different maturities were seeded eight times at 10-day intervals from early spring to late summer in 2018 and 2019, supplying the different environmental conditions for grain in-field drying. The dynamics of grain moisture concentration were measured for all cultivars to analyze varietal differences in characterization of grain in-field drydown. Grain moisture concentration at harvest was positively correlated to growth period (r = 0.810*, 2018; r = 0.912**, 2019). Usually, the early-maturing cultivars had lower moisture concentration at harvest stage than the late-maturing cultivars. Grain moisture concentration at physiological maturity was negatively correlated to grain filling period (r = -0.484**). It was higher for early-maturing cultivars than late-maturing cultivars. Grain moisture loss rates of pre- (r = -0.655**) and post-maturity (r = -0.492**) were both inversely associated with the growth period, and were faster for early- than late-maturing cultivars. Furthermore, there was a significantly positive correlation between the grain moisture loss rate of pre-maturity and post-maturity (r = 0.466**). Overall, the cultivars with high moisture loss rate before maturity declined moisture quickly after maturity, while there was the particular cultivar with high moisture loss rate before maturity but low moisture loss rate after maturity. Duration of growth period affected grain dehydration rate. Generally, compared to late-maturing cultivar, grain of early-maturing cultivar had faster drying rates of pre- and post-maturity and lower moisture concentration at harvest stage. However, there was the noticeable case of particular cultivar when breeding and screening maize with rapid grain dehydration.

      Effects of irrigation on tiller occurrence, photo-assimilates production and distribution in different stem and tillers and spike formation in wheat
      FENG Lian-Jie, YU Zhen-Wen, ZHANG Yong-Li, SHI Yu
      Acta Agronomica Sinica. 2023, 49(6):  1653-1667.  doi:10.3724/SP.J.1006.2022.21045
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      Moderate irrigation based on soil moisture content could increase spike number of wheat, and realize water-saving and high-yielding cultivation, but the physiological mechanism of tiller occurrence and spike formation under this condition is still unclear. A field experiment was conducted in wheat growth seasons of 2019-2020 and 2020-2021, in which the medium-spike wheat Jimai 22 and large-spike wheat Shannong 23 were used as the experimental materials. Three treatments were designed in this field experiment, including no irrigation during the whole growth period, water-saving irrigation, and sufficient irrigation. The characteristics of tiller occurrence and spike formation of wheat were studied. The results showed that the tiller node area and trans zeatin content, the photosynthetic parameters of the uppermost unfloding leaves in main stem at wintering and turn-green stage of two wheat cultivars under water-saving irrigation treatment were higher than no irrigation treatment. Under water-saving irrigation, the stem number of tillers II, III, IP, IV, and others in two spike-type wheat cultivars were increased, the total stem number per plant of Jimai 22 and Shannong 23 under W70 were 1.01 and 0.75 higher at wintering stage and 0.71 and 0.56 higher at jointing stage. The photosynthetic parameter of the uppermost unfolding leaves at jointing stage, dry matter weight and distribution amount of 13C assimilates of main stem and tillers in different positions increased significantly, the total spike number per plant of Jimai 22 and Shannong 23 were 0.36 and 0.41 higher than no irrigation in two years. The grain yield of Jimai 22 and Shannong 23 under water-saving irrigation treatment increased by 35.00% and 44.27%, and water use efficiency increased by 9.23% and 8.55% than no irrigation, respectively. Further increasing the amount of irrigation to sufficient irrigation treatment could increase the total stem number per plant at wintering and jointing stage, but there was no significant difference with water-saving irrigation in the total formation spike number per plant, spike number, and grain yield per hectare, water use efficiency was decreased. Comparison among the cultivars the total stem and spike number per plant of Jimai 22 were higher than Shannong 23, the main reason was that Jimai 22 had higher tiller node area and trans zeatin content, photosynthetic capacity in main stem, and tillers in different positions. The correlation analysis showed that the total stem number and spike number per plant, spike number, and grain yield per hectare were positively correlated with the tiller node area and trans zeatin content, and net photosynthetic rate of the uppermost unfolding leaves in main stem in two wheat cultivars, and there was significantly negatively correlated with auxin and abscisic acid content. These results indicated that the water-saving irrigation could regulate tiller occurrence and spike formation by increasing tiller node area and hormone content, improving the capacity of photo-assimilates production and distribution in main stem and tillers in different positions, thus resulting in the higher yield and water use efficiency.

      Effect of phosphorus fertilizer rate on rapeseed yield and quality (Brassica napus L.)
      YAN Jin-Yao, SONG Yi, LU Zhi-Feng, REN Tao, LU Jian-Wei
      Acta Agronomica Sinica. 2023, 49(6):  1668-1677.  doi:10.3724/SP.J.1006.2023.24175
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      Rapeseed is an important oil crop and is sensitive to phosphorus deficiency. The soil phosphorus supply in the main rapeseed producing areas in China is poor, and phosphorus deficiency often leads to yield reduction of seed. To investigate the effects of phosphorus nutrient supply status on rapeseed yield and quality at the same time, a phosphorus fertilizer rate field experiment was conducted in two seasons of 2019-2021 in the middle reaches of Yangtze River with five treatments of 0, 45, 90, 135, and 180 kg P2O5 hm-2. The results showed that phosphorus application significantly increased the number of pods per plant, seed number, and 1000-seed weight, and thus increasing rapeseed yield. The average yield without phosphorus treatment was only 190 kg hm-2, and phosphorus application increased the yield by 8.5-12.5 times, and the maximum yields obtained according to yield effects corresponded to phosphorus applications of 51.8-65.0 kg P2O5 hm-2. The response of rapeseed phosphorus content, water content, oil content, protein, glucosinolate, oleic acid, linolenic acid, and stearic acid to phosphorus fertilizer rate reached highly significant levels, while erucic acid, linoleic acid, and palmitic acid showed less response. The oil content of rapeseed tended to increase and then decrease with increasing phosphorus application (highest at 90 kg P2O5 hm-2 and 135 kg P2O5 hm-2), protein content tended to increase slowly, and glucosinolate content decreased significantly. Excessive application of phosphorus fertilizer decreased the oleic acid content and increased the linolenic acid content of rapeseed. Path analysis showed that seed phosphorus content, oil content, and linolenic acid content had a greater direct positive effect on yield, water content, protein and linolenic acid had a greater indirect positive effect on yield through seed phosphorus content, and glucosinolate, oleic acid, linoleic acid, and stearic acid had a greater indirect negative effect on yield through seed phosphorus content. The combined results showed that the recommended phosphorus fertilizer rate for targeting rapeseed yield and edible oil quality was 45-90 kg P2O5 hm-2, and for pursuing forage cake meal protein yield, the recommended phosphorus fertilizer rate was 90-135 kg P2O5 hm-2.

      Effects of foliar spraying selenium on photosynthetic characteristics, yield, and selenium accumulation of common buckwheat (Fagopyrum esculentum M.)
      LEI Xin-Hui, LENG Jia-Jun, TAO Jin-Cai, WAN Chen-Xi, WU Yi-Xin, WANG Jia-Le, WANG Peng-Ke, FENG Bai-Li, WANG Meng, GAO Jin-Feng
      Acta Agronomica Sinica. 2023, 49(6):  1678-1689.  doi:10.3724/SP.J.1006.2023.21039
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      Dietary selenium supplementation is the main way for people to take in selenium. Selenium bioaugmentation technology can effectively improve the selenium content of crops. In this study, the material was common buckwheat variety Xinong 9976, and sodium selenite was used as the selenium source. The application rates of pure selenium in the field were 0 (Se0), 5 (Se5), and 20 g hm-2 (Se20), respectively. The changes of photosynthetic characteristics, dry matter accumulation and transport, agronomic traits, and yield of common buckwheat were explored during two consecutive crop growing seasons from 2020 to 2021, and the effects of selenium content in organs, selenium transport factors and selenium utilization rate in grains of common buckwheat under different exogenous selenium concentrations were analyzed. The results showed that foliar spraying sodium selenite could improve the photosynthetic substance production capacity of common buckwheat leaves, and the chlorophyll content (SPAD), net photosynthetic rate (Pn), transpiration rate (Tr), intercellular CO2 concentration (Ci), and water use efficiency (WUE) of leaves increased by 13.12%, 11.50%, 5.48%, 5.95%, and 5.77% on average compared with the control. Selenium spraying significantly increased the maximum photochemical efficiency (Fv/Fm), actual photochemical efficiency (ΦPSII), and photochemical quenching coefficient (qp) of buckwheat leaf photosystem II, decreased the non-photochemical quenching coefficient (NPQ), enhanced the ability of capturing and transforming light energy, reduced the loss of ineffective light energy, and improved the utilization ability of high light. Under two different selenium application rates, the dry matter accumulation of stem and leaf of Fagopyrum esculentum was significantly higher than that of Se0 treatment, but the distribution ratio was significantly lower. The dry matter accumulation and dry matter distribution ratio of grain were improved. The dry matter transport capacity, migration rate, and contribution rate of stem and leaf to grain reached the maximum at Se5 and Se20 concentrations, respectively. Selenium spraying increased the number of 1000-grain weight, grain number per plant, and yield by 3.1%-11.3%, 13.5%-32.0%, and 4.9%-23.2% compared with the control, respectively. The selenium content and transport factors in different parts of common buckwheat reached the maximum under Se20, while the utilization rate of selenium in grain was higher under Se5. In conclusion, foliar spraying of sodium selenite can improve photosynthesis and chlorophyll fluorescence parameters of common buckwheat, increase the accumulation of dry matter in various organs, and promote the transport of dry matter to grains, thus increasing the grain yield of common buckwheat. In addition, the selenium content in all parts of common buckwheat was significantly increased after foliar spraying with selenium, and the selenium utilization rate of grain was the highest under Se5 treatment, and the selenium content of grain met the national grain selenium-enriched standard, which was suitable for popularization and application in Loess Plateau area.

      Study of regulating effect of auxin on floret opening in rice
      HE Yong-Ming, ZHANG Fang
      Acta Agronomica Sinica. 2023, 49(6):  1690-1698.  doi:10.3724/SP.J.1006.2023.22027
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      Floret opening which is driven by swelling of lodicules has a direct effect on rice pollination and fertilization. Auxin is an essential phytohormone in regulating reproductive development processes such as anther dehiscence, pollen fertility, and seed initiation. To elucidate the role of auxin in floret opening, the effects of exogenous auxin and its inhibitors on floret opening, and dynamic changes of endogenous auxin levels, and gene relative expression levels of auxin pathway in florets and lodicules were investigated in japonica cultivar Zhonghua 11. The results showed that the panicles soaked with IAA (10-20 mmol L-1) or NAA (0.05-0.50 mmol L-1) delayed significantly floret opening. Under high concentration of NAA (0.5 mmol L-1), compared with the water-treated panicles, the floret opening was postponed by three days. The prolonged opening duration of single floret and decreased seed-setting rate were also observed after IAA and NAA treatments. Treatments with IAA polar transport inhibitor TIBA and function inhibitor PCIB delayed florets opening as well. Furthermore, the application of methyl jamonate (MeJA) could restore effectively floret opening which was retared by NAA pretreatments. A sharp decline of IAA levels was detected two hours before floret opening in natural condition. Compared to that at 1 d and 2 d before opening, IAA level in florets at 2 hours before opening was decreased by 65.85% and 74.27%, respectively. Corresponding to the changes of IAA levels in florets, the relative expression levels of IAA biosynthetic genes (OsTAR2, OsYUCCA3/4/8) in the lodicules were down-regulated during floret opening, while the expressions of catabolic genes (OsGH3.2/OsGH3.8) in formation of inactive IAA conjugates, IAA efflux transport genes (OsPIN1, OsPIN1a), and its positive regulator BG1 gene were significantly up-regulated. 13 differentially expressed early auxin response genes (OsAUX/IAAs, OsARF15, OsSAURs) were also identified, among which, 10 were up-regulated and 3 down-regulated. In conclusion, rice floret opening was regulated by endogenous auxin, but was inhibited by elevating auxin level in lodicules.

      RESEARCH NOTES
      Identification and gene mapping of long grain and degenerated palea (lgdp) in rice (Oryza sativa L.)
      LIN Xiao-Xin, HUANG Ming-Jiang, WEI Yi, ZHU Hong-Hui, WANG Zi-Yi, LI Zhong-Cheng, ZHUANG Hui, LI Yan-Xi, LI Yun-Feng, CHEN Rui
      Acta Agronomica Sinica. 2023, 49(6):  1699-1707.  doi:10.3724/SP.J.1006.2023.22028
      Abstract ( 282 )   HTML ( 31 )   PDF (7321KB) ( 257 )   Save
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      The grain shape, which consists of grain length and grain width, is the primary determinant of grain yield and one of the important appearance quality traits in rice. It is of great significance to identify the related genes associated with grain shape and to study molecular mechanisms for improving the yield and quality of rice. In this study, a long grain mutant named long grain and degenerated palea (lgdp) deriving from EMS (ethyl methane sulfonate) mutation groups of Xida 1B was reported. In lgdp mutant, the elongation of lemma resulted in a long grain. Further SEM analysis revealed that the main reason for lemma elongation was the extremely significant increase in the number of glume cells. Genetic analysis showed that the lgdp trait was regulated by a pair of recessive genes. Using BSA method and the F2 population crossing lgdp with ZH11, the target gene was located between the molecular markers ZLN43 and ZLN-1 on chromosome 3, with a physical distance of about 810 kb. The analysis of RNA-seq and PCR indicated the LGDP candidate gene might encode a MADS-box protein. The qPCR referred that LGDP negatively regulated the relative expression levels of several positive grain length regulatory factors, GW7/GL7, GS3, TGW6, which affected the cell proliferation of glumes and the grain length. The results of this study laid a foundation for the molecular function analysis of LGDP gene in the future.

      Genetic diversity of wheat breeding parents revealed by 55K SNP-based microarray
      LU Mao-Ang, PENG Xiao-Ai, ZHANG Ling, WANG Jian-Lai, HE Xian-Fang, ZHU Yu-Lei
      Acta Agronomica Sinica. 2023, 49(6):  1708-1714.  doi:10.3724/SP.J.1006.2023.21047
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      The objective of this study is to identify the genetic diversity among wheat parental materials from different provinces. To reveal the genetic diversity and population structure by using wheat 55K SNP chip, 150 wheat accessions from Anhui, Jiangsu, Henan, Sichuan, and Shandong provinces were analyzed. A total of 52,537 SNP loci were detected in the 150 wheat accessions. 39,422 high quality markers were obtained, of which 38,135 were polymorphic, accounting for 96.74%. The distribution of 38,135 polymorphic markers among the genomes showed the least in D subgenome (10,450), the most in B subgenome (15,290). The average polymorphic information content (PIC) was 0.315, with a variation of 0.068-0.375. The averaged genetic distance of accessions differed based on the origin: Henan > Sichuan > Shandong > Jiangsu > Anhui. The results of cluster analysis, principal component analysis, and population structure analysis were highly consistent, and the clustering results were consistent with the pedigree, regional origin, and breeding group. The study revealed that the average polymorphism information content in each province was at a moderate PIC level, but the average genetic distance of the materials was close. This indicated that the high-quality germplasm resources should still be introduced to alleviate the material homogeneity, so as to increase the ability of wheat to cope with stress and reduce the vulnerability and risk in actual wheat production.

      Genome-wide identification and expression analysis of PHB gene family in sweet potato
      MEI Yu-Qin, LIU Yi, WANG Chong, LEI Jian, ZHU Guo-Peng, YANG Xin-Sun
      Acta Agronomica Sinica. 2023, 49(6):  1715-1725.  doi:10.3724/SP.J.1006.2023.24142
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      The prohibitins (PHB) are SPFH domain-containing proteins found in the prokaryotes to eukaryotes. Plant PHB gene family is involved in many important functions in a variety of different biological processes, including growth and development and responses to biotic and abiotic stresses. At present, PHB proteins have been identified in Arabidopsis, rice, maize, soybean, tomato, upland cotton, and other plants. However, the systematic analysis of PHB family in sweet potato is still uncertain. In this study, 11 PHB genes in sweet potato were identified, and the analysis of these conserved protein motifs and gene structures showed that they were highly conserved in phylogenetic subgroups. In addition, the cis-acting elements related to various hormone regulation and stress were predicted in the promoter region and the relative expression patterns of IbPHB genes were different in different parts of plants and under different abiotic stresses. This study systematically analyzed the general characteristics of IbPHB gene in sweet potato, and provided a theoretical basis for the study of functional characteristics of PHB gene in sweet potato and other plants.

      Genome-wide association analysis of cellulose content and hemicellulose content in grains of barley
      TIAN Min, LIU Xin-Chun, PAN Jia-Jia, LIANG Li-Jing, DONG Lei, LIU Mei-Chi, FENG Zong-Yun
      Acta Agronomica Sinica. 2023, 49(6):  1726-1732.  doi:10.3724/SP.J.1006.2023.21043
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      Fiber is one of the important indexes to evaluate the forage quality of barley, and the analysis of its genetic mechanism has important guiding significance for the selection and breeding of forage barley. In this study, 316 barley varieties were planted in Chengdu and Kangding for two consecutive years, and 75,289 SNPs distributed in barley genome were used for genome-wide association analysis of grain cellulose and hemicellulose content, 65 and 34 significant SNPs (P ≤ 0.05/N) were repeatedly detected for cellulose and hemicellulose traits using the mixed linear model of TASSEL software, respectively. The mean explained phenotypic variation rates of markers were 13.18% and 14.10%, respectively. There were four and one significant correlation loci repeatedly detected for cellulose and hemicellulose content in three or more environments, respectively. The same SNP loci were detected for two traits, indicating that there was genetic correlation between the two traits. Six candidate genes were found for cellulose traits, and one candidate gene was found for hemicellulose traits, which laid the foundation for genetic and molecular mechanism research and genetic improvement of barley fiber.

Co-sponsored:
the Crop Science Society of China
the Institute of Crop Science, CAAS
China Science Publishing & Media Ltd.
Published: Science Press
Editor-in-chief: Wan Jian-min
Associate Editors-in-Chief:
Chen Xiao-ya Yang Jian-chang Zhang Xian-long Wang Jian-kang Xu Ming-liang Liu Chun-ming Wang Dao-wen Sun Chuan-qing Ding Yan-feng Jin Wei-wei Chu Cheng-cai Cheng Wei-hong
Director of the editorial department:
Yan Chun-ling
CN 11-1809/S
ISSN 0496-3490
Post subscription code: 82-336

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  • Started in 2013
  • Covered by SCIE
  • Open access in ScienceDirect

Editor in chief: Wan Jian-min
CN 10-1112/S
ISSN 2095-5421, 2214-5141(online)
Online published:
https://www.sciencedirect.com/journal/the-crop-journal
Submission: https://www.editorialmanager.com/cj/
E-mail: cropjournal@caas.cn
Tel: 8610-82108548

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